Nicotiana tomentosiformis: 104112671
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Entry
104112671 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104112671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104112671
03036 Chromosome and associated proteins [BR:
nto03036
]
104112671
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104112671
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104112671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
104112671
NCBI-ProteinID:
XP_009620956
LinkDB
All DBs
Position
8:89644789..89655085
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AA seq
719 aa
AA seq
DB search
MPGLTSESDDLAMVPVSPEPENHPAVIYPLHHGLKSPIHRLSISWARGNTLQVSVLGKPQ
SDMATDVDGSEGGGGRVVEVKLSNSGDEEVDAARWRRIAYGSVIPFALLQSRKHSLSAMS
LDNPPYKAQWWEHVIEYSKEINSLLGDRKSPPRSIIEDPKSVVIETAEPMCLKAAWELLE
TFYVDKQSQSWIPERLLDWLADYDPLFSGTVPTIHSKFVDFQQELAGVQVVEEDPNYWEA
IASALSVGWLGTVVKLLRLHGSYRFDQLASRETENGLVEAVALLISKMPRMRPNLREENL
GECYKTKPDFMKAWEKWRAQITKLDCSSYWLQCDHQQTREGLKNLIQIMLGNPSVLSNAT
FNWMELFISHFLYVRPFTAGLESMYNLAQKCMQLKPISSPHKLFGLVLGILGENTEVVLA
ECSRSFGPWMMAHAVELLTAGSTHAEILLHEEQSKLGGISIEELHKLVYAQVLSSHAFTW
QIAPIYLTSCIKQGIGLLENLLYKQPVQHSQILLKSIEICRLYELDTISSNIMRIAGLHH
WKHGRKGSGVFWLQQARDEFRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAG
SLEFLNKYRDFRRSLLQVHGDTPTDGARNAAEALVSLMKNPSTPQRFWLPLLYDSLKLLN
WQERPLLNVSQTQLLLNKLQELSMARLRPDFVEADLPSDSLSSIRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtttgacgtcagagtccgatgaccttgcaatggttccagtatcgccggagccg
gaaaatcatccggcggtcatctatcctctccatcacggtctcaaatccccgattcatcga
ctctccatttcctgggcgcgtggcaacactctccaagtctcagttctcgggaagcctcag
tcggacatggcgactgacgtagacggcagcgagggtggtggcggtagagtggtggaggtg
aagctgagtaacagcggagatgaggaagttgatgccgcaagatggaggagaatagcttac
ggttccgtcattcctttcgcgcttcttcagagccgcaagcattctctgtctgctatgtcg
ttggataaccctccttacaaggcacagtggtgggagcatgtcatagagtacagcaaagag
ataaattctctgctcggtgatcgaaaatcacctcctagatcaattattgaagatcccaag
tcggtagtaattgaaactgcagagccgatgtgtttgaaagctgcgtgggagcttctggag
acattttatgtagacaagcaatctcaatcctggattcctgaacggttgctagattggtta
gctgactacgatcctttattctcgggaactgtaccaactattcattcaaagtttgtggat
tttcagcaggaacttgctggcgtacaggttgttgaagaagatcctaactactgggaagca
atagcatcagcattgtcagttggctggctgggaactgtggtaaaattgctgcgcttgcat
ggttcttaccggtttgatcagttagctagtcgtgagacagagaatggactggttgaagca
gttgctcttcttatatccaagatgcctagaatgcgtcctaatctgagagaagaaaattta
ggcgagtgttacaaaaccaagcctgatttcatgaaggcttgggagaagtggagggcacaa
ataactaaactggactgcagttcgtactggcttcaatgtgatcaccagcagactagagaa
gggctaaaaaatttgatccagatcatgttgggaaatcctagtgttctatcaaatgcaact
ttcaactggatggagctttttatatcccatttcttgtacgttaggccatttactgcgggt
ctagagagcatgtacaatttagctcagaagtgcatgcaattaaaaccaatttccagcccc
cataagctgtttggtcttgtacttggcattcttggagaaaatactgaggttgttctagca
gagtgctcaagatcatttggcccatggatgatggcacatgctgtagagttgttgacagct
gggagcactcatgcggaaattcttttgcatgaagagcagtccaaactggggggaatcagc
atagaagagctccataaacttgtatatgcacaagttctgtcttcccatgcgttcacatgg
caaattgctccaatatacttgacttcatgcataaaacaagggattggattgttggagaat
ttgctttacaagcagcctgtacagcatagtcaaattctgttaaagagtatagagatctgc
cgtctgtatgaacttgacaccataagttcaaacataatgaggattgctggtttgcatcac
tggaaacatgggagaaaaggctctggtgtcttttggctgcagcaagctcgagatgaattt
cgtttaaacagaattgccaagcaattatttgatttcgtggggaagtcagtttctgatgaa
ggattcaagcaatgggaaggtctcatagagttgctgggttctgagtctagaactgctggc
agtcttgagtttctgaacaagtacagggattttaggagatccctgctgcaggttcatggt
gatacacccactgatggtgctcgtaatgcagctgaagctctcgtctctctcatgaaaaat
ccttccacgcctcaacgcttttggttacctcttctatatgattcattgaaattgttaaac
tggcaggagcgacctttgcttaatgtctctcaaactcagcttctcttgaataaactgcaa
gagttgtccatggcaagattgaggccagactttgttgaagctgacttgccatctgattca
ttaagctctatcagactggctcttgccactaacctgggtcgtgcaatccttgaagagtga
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