Nicotiana tomentosiformis: 104113384
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Entry
104113384 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104113384
04121 Ubiquitin system [BR:
nto04121
]
104113384
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104113384
Membrane trafficking [BR:
nto04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104113384
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104113384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING_5
DUF7129
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104113384
NCBI-ProteinID:
XP_009621829
LinkDB
All DBs
Position
1:140553945..140556331
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AA seq
342 aa
AA seq
DB search
MDGRGASRYWCHQCSRRVDPTLEVELKCPICQQGFVEEMGSETALENDFGGSDSDRALSL
WAPILLGMMSNPRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNSTTIL
QLLQSIRAGMENADGENSREAGRDGEERVILVNPFNQTIIVQGSYDSDNNDRPIGSLGDY
FIGPGLDMLLQHLAENDPNRYGTPPAQKEVVEALPAVKIDETMQCSVCLEDFEIGTEAKE
MPCKHKFHSGCILPWLELHSTCPVCRHQLPSDESKVENVTDNTNAAQSSDTRNENGRRFP
VSLPWPLSGLFSSGTQSSNGNSSSTTTSSSGNANSNAHMHDD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagaggagcatcaagatattggtgtcatcagtgttcaaggagggtggacccc
acgttggaggtggagttaaaatgtcccatttgtcaacaaggttttgtcgaggaaatggga
tcagaaactgcccttgaaaatgattttggagggtctgactccgatcgggccctatcactt
tgggcgccaatcttgttaggcatgatgagcaatcctcgtcgtcgctctaggtttaggcat
catctcgaatttgatagtgatgatgatgatgatcatactcgtgaaggtggggagacagaa
cttgatcctgagctggcatctataatgaataggcggaggaggaactccaccactattctc
cagctcttgcaaagtattcgagctggaatggagaatgctgacggtgaaaatagtagggag
gcaggtagggatggcgaggagcgtgtgatacttgtaaatccattcaatcaaaccatcatt
gtgcagggttcttatgattcggataataatgaccgacccattggctcattgggtgattat
ttcattggtcctggtttagacatgttgctgcaacatttggctgagaatgatccgaatagg
tatggtactccaccagctcaaaaagaggttgtagaggcgttgcccgcggtgaaaattgat
gagacgatgcagtgttccgtgtgcttggaagactttgagattgggactgaagccaaagag
atgccttgtaagcacaagtttcatagcgggtgtatcttaccgtggttggagcttcatagt
acctgtccagtctgtaggcatcagttaccctctgatgaatcaaaagttgagaatgtaact
gataacacaaatgctgctcagagtagtgatacaaggaatgaaaatggtcgacgttttcca
gtgtcgcttccatggcctttgagtggtttgttttcatcaggtacccaatctagtaatgga
aattcatcatcaacgactacttcttcatcaggaaatgcaaactcaaatgctcatatgcat
gatgattag
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