Nicotiana tomentosiformis: 104113399
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Entry
104113399 CDS
T05025
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104113399
Membrane trafficking [BR:
nto04131
]
Autophagy
Other autophagy associated proteins
Others
104113399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_RSE1_2nd
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
104113399
NCBI-ProteinID:
XP_009621843
LinkDB
All DBs
Position
5:complement(80791714..80797271)
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AA seq
416 aa
AA seq
DB search
MTTLSSPTSLTVSSSRGTLPPAAYGTYESPMIGASHSGHSEPEISDNDDTELHSVSWNQD
YSCFAAGTSRGFRVYNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGARTNAQYPPNK
VIIWDDHQSRCIGEFSFRSDVCAVKLRRDCIVVVLEHKIYVYNFMDLKLLHQIETVGNPR
GLCCLSHHLNTSVLACPGVRRGQVRVEHFGLNMTKLIKAHDSQIACLTLTMDGLLLATAS
TRGTLIRLFNTMDGTQLQEVRRGVDKADIYSITLSPNVQWLAVSSDKGTIHVYSLRVRVV
GEDAAADSAVRTPTLLCQNSSNSLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQF
HLPECTQYIVAFGSQNTVVTAGTDGSFYRCSFDPVNGGEMVQQEYVRFLKTESRQR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactactctatcatccccaacgagtttaactgtctcatcatctcgagggacacttcca
ccagcagcctatgggacatatgaatcccccatgatcggggcctctcattctggccattct
gaaccagagatcagtgacaatgatgatacagagctacactctgtgtcatggaatcaggat
tacagttgctttgctgctggcactagccgtggctttcgtgtatataactgtgatcctttc
aaagagactttcagacgtgatctgaaaagtggtgggtttggaatagtagagatgttgttc
cgatgcaacattttagcacttgtcggtgccaggactaacgcccaatacccacctaataaa
gttattatatgggatgatcatcagagccgatgcattggtgaattttcatttaggtctgac
gtttgtgcagtgaaactaagacgggattgtattgttgtagtccttgagcacaagatatat
gtctacaactttatggatctgaagcttcttcatcagatagaaactgtgggcaatcccagg
ggactttgctgcctctcacaccatttaaatacatctgtattggcttgcccaggcgttcga
agaggacaggtccgggttgagcattttggcttgaatatgacaaagttgatcaaggcgcat
gattctcagatagcatgtttaaccttgactatggatgggctgcttcttgcaacagcaagc
actcggggaactttgataagactcttcaacaccatggatggaactcagttgcaagaggtg
cgtagaggggttgacaaagcagatatctatagtattacactatcaccaaatgtgcagtgg
ttggccgtctctagcgacaaaggtaccatccatgtgtacagcctaagagtacgtgttgtt
ggcgaggatgctgcagctgattctgctgttagaactccaacattattgtgtcaaaattca
tcaaattctcttgatgcacttatttctccaagtactggagccaaccctggttcatcattg
tctttcatgaaaggagttctgccaaaatactttagctctgaatggtcatttgctcagttt
cacttgccagaatgtacccagtacattgttgcgtttggttctcagaacactgttgttact
gctggcactgatggaagtttctataggtgcagctttgatcctgtgaatggaggagaaatg
gtacagcaggaatatgtccgctttctgaaaacagagagtaggcagagatag
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