Nicotiana tomentosiformis: 104113422
Help
Entry
104113422 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104113422
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104113422
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104113422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_4
DUF8106
zf-CCHH
DUF7830
zf-C2HC_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-GeneID:
104113422
NCBI-ProteinID:
XP_009621873
LinkDB
All DBs
Position
5:68786813..68802393
Genome browser
AA seq
462 aa
AA seq
DB search
MEKGESSSAKLSEFGEVWAKLIPVDSHYSEIELRLKETVICSEVKNSSSEKQEWCKITRN
VDLVSAMMQNKSSKAIVVDETVVQDEHVAVIKCGSEISLGPSDEGFVKYRLEMMPTEESR
RYMQISLDVEYAKCCICLNIWHDVVTAAPCLHNFCNGCFSEWLRRSQERRSSVLCPQCRA
VVQFVGRNHFFHNIEEDILLADPSLKRSSEDVVLLDSCASIKSPLEQVLGSRKSRRKRER
SPSDAANSWEPLCPQCGIEFGGFQCDESTVHLQCQACGGMMPSRLNIGMQQHCLGCDRAF
CAAYWHSQGVNGSNLHPLCSPETFKPIAERTITRIPSLAHEKNHYEQNITERCIREMTRS
LQDVVADWILKLDKREIDRTRMPLNHAEMITSRTYTCSECYDKLVSFLLYWFRVTMTAHL
LPSEVAQREDCWYGYACRTQHHNQEHARKRNHVCRPTRGSHM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggagaaagctcaagtgctaaactttcagaattcggtgaagtctgggcgaaa
ctcataccggtggattctcactattcagaaattgagttgaggctgaaggagactgtaata
tgtagtgaagtgaagaattcctcttctgaaaagcaagaatggtgtaagataacaaggaat
gtggatctagtttctgccatgatgcaaaataagagttcaaaagcaattgttgttgatgag
acggtggttcaggatgagcatgttgctgtaattaagtgtggcagtgaaatttctctgggc
cccagtgatgaaggttttgtgaaataccgactcgaaatgatgcccactgaggaatctcgc
agatatatgcagatttctctcgatgttgagtatgcaaaatgctgtatctgcttaaatatc
tggcatgacgttgtcacagctgcaccttgccttcacaatttctgtaatggatgcttttca
gagtggctaaggaggtctcaagagaggcgttcaagtgttttatgtccccagtgcagagca
gttgtacagtttgttggaagaaaccattttttccataacattgaggaagatatactgctt
gcggatccttccttgaaacgctcgagtgaagatgttgtgctgcttgattcctgtgcatca
ataaaatcacctcttgagcaggtcctcggcagtagaaaaagtcgccggaagagggaacgt
tctccatcagatgcagcaaatagttgggagcctttatgccctcagtgtggcattgaattt
ggaggttttcagtgcgatgaaagcacagttcatcttcaatgtcaagcatgtggtggaatg
atgccctctcgattaaacattggaatgcaacaacactgtttgggatgtgatcgagcattt
tgtgctgcttattggcattctcagggagtcaatggaagcaatttacatccactttgcagt
cctgaaactttcaagcctattgctgaacgtacaattactagaataccctccttggcacat
gagaagaatcattatgaacaaaatattactgaaagatgcattagagagatgacaaggtcg
ttgcaggatgtggtagctgattggattttgaagcttgataagcgggagatagatcgcaca
aggatgcctttgaatcatgctgagatgataacttcccggacatatacttgtagtgagtgc
tatgacaagttagtctcattcctattgtactggtttagagttacaatgacagcacatctt
ttaccttcagaggtagcacaaagagaagactgctggtatggatatgcttgtcgcacacaa
caccataaccaagagcatgctcgcaaaaggaaccatgtctgccggccaacaaggggtagt
catatgtag
DBGET
integrated database retrieval system
