Nicotiana tomentosiformis: 104113480
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Entry
104113480 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104113480
Membrane trafficking [BR:
nto04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
104113480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
WD40_Prp19
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104113480
NCBI-ProteinID:
XP_009621942
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All DBs
Position
1:complement(49111261..49130680)
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AA seq
1129 aa
AA seq
DB search
MYMAYGWPQVIPMESTGLCPSSSQQIVYLKLINRLLLVVSPTHLELWSSSQHRVRLGKYK
RSSDSIQKEGENLRAVWSPDTKLIAVLTSSFYLHILKVHFTERKIQIGGKQPTGLFLASI
ALLLNEQVPFANRNLTMSNMVCDNKHMIVGLSDGSLYNISWKGEFCGAFDAFDLDVQPHD
GSGIPKLASSLENGLASGGSLSFSKFSHHSLNNSAVVHLEFSLPLRLLVVLFSDGQLVLC
SVSKKGLKQMESIKAEKRLGSGDAVCAAVASEQQLLAVGTRRGVVELYDIAESASLMRSV
SLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSASS
PVVKRNQECKYEPMMSGTSLMNWDEYGYKLYAIEEGSPERIIAFSFGKCCLNRGVSGITY
VRQVIYGEDRLLVVQSEDTDELKLLHLSLPVSYISQNWPVQHVAASKDGMYLAAAGLHGL
ILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGKIVVVCNYDDSSDGYELLFYPRYHLDHSS
LLCRKPLLTKPIVMDVYQDYLLVTYRPFDVHIYHVKLSGELTPSSSPDLQLSTVRELSIM
TAKSHPASMRFIPDQLPRESVAGNGGLSTSLDLSREPTRCLILRTNGELSLLDLDEGRER
ELTDSVELFWVTCGQSEEKASLIEEVSWLDYGHRGMQVWYPSPGVDAFKQEDFLQLDPEL
EFDREVYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKKE
EALRLAQLSAEKPHFSHCLEWLLFTVFEADISGKNPSKNQSVIPNHSTNSSLLDKTCDLI
RNFPEYFDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEG
PAVSQYCALRLLQATLDESLYELAGELVRFLLRSGREYEPTTTDSEKLSPRFFGYFLFPS
SYRRQTLESKGSFKELSAHVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQR
ERYGSARLDNFASGLELIRQKLQMETLQSRLDAEFLLSHMCSVKFKEWIVVLATLLRRSE
VLFDLFRHDLRLWKAYNITLKSHPSFVEYHDLVESLDEKLSSASNSEET
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatggccacaggtcatccctatggaatcaactgggttatgccct
tcttcttctcagcaaattgtatacctgaagctcatcaatcgcttattgcttgtcgtttca
cctactcatcttgaactatggtcctcctcccagcatagagtgagattgggcaagtacaag
agaagctctgattcaattcagaaggaaggggagaatttgcgcgccgtttggagtcctgat
accaaattgattgccgtccttacctcttccttctatctacacattctgaaggtccatttt
acagaaaggaaaatacaaattggaggcaaacaaccaactggtttgtttctagcaagcata
gctttgctcttgaatgaacaagtgccttttgctaacaggaacttgacaatgagcaatatg
gtttgcgacaacaaacatatgatagttgggctttctgatggatctctgtataatatatcc
tggaagggcgagttttgtggggcctttgatgcctttgatcttgatgttcagcctcatgat
ggcagtggcattcctaaactagcaagttctttggaaaacggtcttgcttctggcgggagt
ttatctttttctaaatttagtcatcattcgttgaataactctgccgtggtccacttagaa
ttctccttacccttgaggttgcttgttgtgctattttctgatggacaactggtcttgtgt
tctgtgagcaaaaagggtctgaagcaaatggagtctatcaaagctgaaaagagactgggc
tctggtgatgctgtatgtgctgcagttgcttcagaacaacaactccttgctgttggtacg
agaagaggtgttgttgagttgtatgacattgcagaatctgcttcacttatgcgttctgtt
tctctgtatgattggggatattcagtggaagatactggggctgtcagttgtgttgcatgg
acacctgataattctgcttttgcagttgggtggaagttaagagggctaacagtttggtct
gtttctggctgtcgcttgatgtccacaattcgtcaaattggcttaagttctgcgtcttct
ccagttgtcaaacggaatcaggaatgtaaatatgaacctatgatgagtggtacctcgctg
atgaactgggatgaatatggatacaagctttatgctattgaagaaggatctccagagaga
attattgcattctcttttggaaaatgctgtctgaacagaggagtctctgggattacttat
gtccgacaagtaatctatggtgaagatcggttgcttgttgtgcagtcagaagatactgat
gaactaaaactcttgcatcttagccttccagtttcctacatctctcagaattggccagtt
caacatgtggcagctagtaaggatggaatgtacttagcagctgctggccttcatggactg
atcttatatgacataagattgaaaaagtggcgagtttttggagatgtcactcaggaacaa
aagatccagtgcagaggcttgttatggcttgggaagattgtggttgtctgcaactatgat
gattcttctgatgggtatgaattgcttttctatcccagatatcaccttgatcatagttca
ctactatgtcggaaacctttgcttaccaaaccgatcgtcatggatgtttaccaagattat
ctacttgtcacttaccggccctttgatgtccatatttaccatgtgaaattatctggtgaa
ctaacaccttcgagctcccccgatttacagctttctacagtacgagagctatcaatcatg
actgcaaagagccatcctgcttcaatgcgttttattcctgatcagctcccaagagaaagc
gttgcagggaatggtggcctgtcaacttctttggatctgtccagagagcctacccgatgc
ttaatactgcggacaaatggagagctttcacttcttgatttggatgaggggagagaaaga
gaactcactgactctgtggagttgttttgggttacctgtggtcagtcagaggagaaagca
agcttgattgaggaggtttcatggttagactatggccaccgaggaatgcaggtttggtat
ccatctcccggtgttgacgcttttaagcaagaggatttcttgcagttggatccggagctg
gaatttgatcgtgaggtgtatcctcttggtttgctgccaaacgctggagttgtagttggt
gtctcccagagaatgtcattttccgcatgtacagagtttccatgttttgagccttctcct
caagctcagactattttgcattgtctacttcgacatcttctacagagggataaaaaggaa
gaagctctaagattggcgcaattatctgcagagaagccacatttttctcactgcctagag
tggcttctttttactgtgtttgaagccgacatttctgggaaaaaccctagcaaaaatcag
agtgttattcccaaccattcaacaaattcgtcacttctggataagacatgtgatttaata
agaaattttccggagtactttgacgtggttgttagtgttgcaagaaagactgatggccgg
cattgggcagatttatttgctgctgccgggagatcgactgagctatttgaggaatgcttc
caaaggagatggtatcgcactgccgcttgctatatactagtaattgctaagcttgagggt
ccagctgtaagtcagtattgtgcattgcgtttgttgcaggcaacattggatgagtcttta
tatgaactggcaggggaactggtgaggtttcttctcagatctggaagggaatatgaaccc
acaactactgattctgagaagctatctcctagattctttggatattttctgtttccttct
agttaccggaggcaaactttggagtccaaaggttcatttaaggagctgagtgcacatgtt
gcttctgttaagaatattttagaaagccatgcaagctatttgatgtctggaaaagaactg
tcaaagcttgtcgcttttgtgaagggcacacagtttgacctcgtggaatatttgcagcga
gaaagatatggaagtgctcggttagacaattttgcttcagggcttgaacttattcggcag
aagcttcagatggaaacactgcaaagtcgtttagatgcagagttccttttgtctcatatg
tgctctgtcaagttcaaagagtggattgtagtactggccacacttttgaggcggtctgag
gtcttgtttgatttatttcggcatgatttgcgcttgtggaaagcatacaacattacttta
aagtcccatccatcatttgtcgaataccatgacttggttgaaagcttggatgaaaagctt
tcatctgcttcaaattcagaagagacgtga
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integrated database retrieval system
