Nicotiana tomentosiformis: 104113552
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Entry
104113552 CDS
T05025
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03440
Homologous recombination
nto03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104113552
03460 Fanconi anemia pathway
104113552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104113552
03400 DNA repair and recombination proteins [BR:
nto03400
]
104113552
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104113552
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Topoisomerases
104113552
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104113552
FA (Fanconi anemia) pathway
104113552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
zf-CCHC_2
Zn_ribbon_GRF_2
Toprim_4
Motif
Other DBs
NCBI-GeneID:
104113552
NCBI-ProteinID:
XP_009622049
LinkDB
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Position
5:complement(58835541..58889289)
Genome browser
AA seq
913 aa
AA seq
DB search
MAGGGGGGRVIRVLNVAEKPSVAKAVSGILSRNQGGGMRVRDGRSRYNKIFEFNYTIRNQ
PCQMLFTSVTGHLMELEFDDRFRKWHSCDPLHLYDAPVRKYVPQDKLDIKRTLEEEASRC
QWIILWLDCDREGENIAFEVLEVCRQANHNLNVWRARFSALIDREIHQSAQTLVQPNQLF
SDAVDVRQEIDLRIGASFTRFQTMLLRDAFVLDFATDDRNLVLSYGPCQFPTLGFVVERY
WEIQAHEPEEFWTINCTHNFDEGSATFNWMRGHLFDYTCAVTIYEMCIQEPTATVSKVKQ
QEKLKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDCFSEKTDL
RTMVQEQGGHPVWGSYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGESRWSQDH
HRVYELVVRHFLACVSKPAVGAETTVEIDIAGESFFACGRVILAKNYLDVYRFESWGGSV
IPTYTFGQQFIPTSLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFY
AIKDSSTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSMGTKRKTEVLETCL
QQMKACFLDARANKGKLFEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKP
DGNFMVGCLGYPQCRNVVWLPGSLSEASVTENTCTSCGPGPVYKIQFRFRRLEIPPNYSA
QHIGCIGGCDDILRQLVEICGTGSRSSSNTFGRGRGNPRASSSAQRGNSRAQGSCAYCRQ
TGHLSNDCPSQASRSRTARSQEVDLQNGEPLIPCNSCGEPCNLRTANTANNRGRKFFSCQ
SRECNFFVWEDTLNGGERTNTSASTSSRRGGRGQGGPNTSGVSFVSATGEPITGRCFICG
DPGHFANVCPRRG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcggaggcggagggcgggtgataagggtgctgaacgtggcagaaaagcca
tcggtggcgaaggcagtgtcggggatactatcgaggaatcaaggaggtgggatgagagtg
agagacggacgttccaggtacaacaaaatcttcgagttcaactacaccattcggaaccag
ccttgccagatgctctttacctctgtcaccggccacctcatggagcttgagtttgacgat
cgtttccgcaaatggcactcctgtgaccccctccacctctacgatgcccctgttcgcaag
tatgtccctcaggataaattggatatcaaaaggacactggaggaagaagccagtagatgt
cagtggattatattgtggcttgattgtgatagagaaggagaaaatattgcatttgaagtg
ttggaagtatgtagacaagcgaatcataaccttaatgtgtggagagctcgtttctctgcc
ttaattgacagggaaattcaccaatcagcgcagacccttgttcagccaaaccagttattt
tctgatgctgtagatgttcggcaagagatagatcttcgtattggagcttcttttacaaga
tttcagacaatgcttctgagagatgcatttgtccttgattttgcaactgatgatagaaat
cttgtcttaagctacggtccctgccagttccctacacttggctttgttgtggagcgttat
tgggaaatacaagcacatgagcctgaagagttttggacaatcaattgtactcacaatttc
gatgaaggcagtgctacgtttaactggatgcgtggtcatctgtttgattacacatgtgca
gtaacaatttatgagatgtgcatccaggaacccactgcaacagtttccaaagttaaacag
caggagaaactcaaatacccccctcatccattaagtacgattgagcttgaaaagcgtgca
tccagatacttccgtatgagttccgagcagacaatgaaggtggcagaagatctatatcaa
aatggttttatcagttatcctcgcacagaaactgattgcttctcggagaagactgacttg
cgtacaatggtgcaagaacaaggtggtcatcctgtatggggttcatatgcgcagcgccta
ctagaccctcaatcaggactatggagaaaccctagtggaggtgggcatgatgacaaagcc
catccacctattcatccaaccaaattttctgctggagaatctaggtggagccaggaccac
catagagtgtatgagttggttgttcgccatttcttggcctgtgtttctaaacctgctgtt
ggggctgaaactacagttgagattgatattgctggtgaatccttttttgcatgtgggaga
gtgatacttgcaaaaaactaccttgacgtgtaccgatttgaatcatggggaggttcagtg
atccccacgtacacttttggtcaacagtttataccaacaagtttgacccttgattcagga
gttactagacctcctccccttttaagtgaggctgatctattgggttgtatggacaaggct
ggcattggaactgatgcaacaatgcatgaccatataaagaaactacttgatcgattttat
gcaattaaagactcgagcactcggttctcgccaactaaactaggggaggcgctagttatg
ggatatgatgatatgggttatgaactatggaaaccatatctccgtgctatgatggaatgt
gatatgaaagctgttagcatggggaccaagagaaagacagaggttctagaaacttgcttg
cagcagatgaaagcttgttttttagatgccagggcaaacaaaggaaaactctttgaagcc
atggctatcttctttgaaagatcaaatagatccagcggtggcgagcaacaagcagttgga
gatgtcgtgcggagatgtggactttgtctagagtcagatatggtactcagacaaaaaccg
gatggtaactttatggttggttgcttgggttacccacaatgcagaaatgttgtctggcta
cctggatctctatcagaagcttctgttacagagaatacgtgcaccagctgcggtccagga
ccagtatacaagattcaatttagatttcgccggctggaaataccgccaaattatagtgct
caacatataggttgcattggtggctgtgatgatattctaaggcagctggtggaaatttgc
ggaactggttctcgcagtagttcaaacactttcggcagaggacgaggaaaccctagagca
tccagcagtgcacagagaggcaattccagagcacaaggttcttgtgcatactgcaggcaa
acagggcatttgtcaaatgattgtccttcacaggcttctcgtagtcgcactgctcggtct
caggaagttgacttgcaaaatggagaacctttgatcccttgtaattcatgtggagagcct
tgcaatttgcgcactgccaatactgccaacaacaggggaagaaagttcttttcatgtcaa
tcacgggagtgcaatttttttgtttgggaagataccctcaatggaggtgagcgtacaaat
acttctgcgtccactagcagcagaagaggtggccgtggccaaggtggtccaaataccagt
ggtgtgtcatttgtgtcagcaacaggtgaaccaataactggcagatgtttcatttgcggt
gatccaggtcactttgctaatgtatgtccacgtcgtggttga
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