Nicotiana tomentosiformis: 104113668
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Entry
104113668 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104113668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104113668
Spliceosome [BR:
nto03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
104113668
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
104113668
NCBI-ProteinID:
XP_009622202
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Position
2:complement(53176063..53188822)
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AA seq
563 aa
AA seq
DB search
MTKKREVEDSLVAEEASPKRQKVIEHSSPSLPPIAFENPLLPLASYDDDDEDDEDDGRRG
HIAEQVINNGGNKEQNGYSYDEEEDEDDEYHGRSQGKRNRAIEIRRDCPYLDTVNRQVLD
FDFEKFCSVSLTNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVYINLRTEKVYCLPD
GYEVIDPSLDDIIHVLNPRFNGEQVEQLDKSRQWSRALDGSDYLPGTVGLNNIKETDFVN
VTIQSLMRVTPLRNFFLIPENYQHSRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM
KASKKRFRIGAQSDPVEFMSWLLNTLHAELRTSKKGSSIIHRCFQGELEVVKEMHSRPIA
EKRENGDAPNNGNGEDGQHGSHNIAMESSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPL
FNILKKFDGETVTEVVRPRIARMRYRVTKLPQYLILHMRRFTKNNFFMEKNPTLVNFPVK
NLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHV
SETLPQMVALSETYMQIYEQHQQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagcgagaagtagaagatagcttggtggctgaagaggcaagcccaaaacgg
cagaaggtaatagagcattcttctccctctcttccaccaattgctttcgagaatccgctt
cttccacttgcatcttatgatgatgatgatgaagacgatgaggatgatggaaggagagga
cacattgccgagcaagttataaataatggtggaaacaaggagcaaaatggctactcatac
gacgaggaagaagatgaggatgatgagtatcatggtagaagccaagggaagcgaaatcgt
gcaattgaaattcggagggactgcccttatcttgatactgtaaatagacaggtattggat
tttgacttcgagaaattttgctcggtctctctcacaaatttaaatgtgtatgcatgttta
gtttgtgggaagtatttccaaggaagggggcccaagtcccatgcatatacacacagtctt
gaagcagggcaccatgtgtatatcaatttacgaacagagaaagtttattgtcttcctgat
ggatatgaagtcatagatccatcgcttgatgacattatacacgtgctgaatccaagattt
aatggggagcaggttgaacaactcgataagagccgacaatggtctagggcacttgatggg
tctgattatcttcctggaacggttgggctgaataacatcaaggagactgattttgtcaat
gttacgattcagtctttgatgcgagtaactcctttgagaaacttctttcttatccctgaa
aattatcaacacagtagatctcctcttgttcatcgatttggagagctcacccgaaagatt
tggcatgcacggaactttaagggacaggtgagtccgcatgagttcttgcaagcagttatg
aaagctagtaaaaaacgttttcggataggtgcacagtctgaccctgttgaatttatgtca
tggcttctgaatacccttcacgccgagcttagaacttccaaaaaaggcagtagcataatc
caccggtgctttcagggggaattggaggttgtgaaagagatgcatagtagacctattgca
gaaaagagggagaatggggatgccccgaataatggcaatggggaagatggtcaacatgga
tctcacaatatcgccatggaaagtagcagaatgcctttcttaatgcttggactcgatttg
ccacccccacctctttttaaagatgtcatggaaaagaatattattccccaggtaccatta
ttcaacatacttaagaagtttgacggtgagactgtgactgaagttgtaaggcctcgtata
gcgaggatgagataccgtgtaacaaaattgccgcagtatctaattctccacatgcgaagg
tttacaaagaacaatttctttatggagaaaaatccgacgcttgttaacttcccggtgaag
aatctagagctcaaggattatattcctctgccagcaccaaaggagaatgagaagcttcgc
tcaaagtatgatttgattgctaatattgttcatgatggtaagccaggtgaaggatcctac
agggtgtttgtccaacgaaaatcagaagaactttggtatgagatgcaagacctacatgtt
tctgaaactcttccccaaatggttgcactttctgagacttatatgcagatatatgagcag
catcagcagtga
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