KEGG   Nicotiana tomentosiformis: 104113749
Entry
104113749         CDS       T05025                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104113749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104113749
   03041 Spliceosome [BR:nto03041]
    104113749
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104113749
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104113749
Spliceosome [BR:nto03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104113749
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35
Other DBs
NCBI-GeneID: 104113749
NCBI-ProteinID: XP_009622309
LinkDB
Position
1:complement(154221845..154225295)
AA seq 489 aa
MAKKRKTRASEATAQPVEEEQQNIKQESADLEPEQEQEQEQEEYQNDTVEEEEAVQEDEE
DPEPEEEDDNDNGDDNEEEEEENPGSGNNAVNEVNGGGSEVKKEEGCDEEEDLEDEPLEK
LLEPFTKDQLTALIKEALVTYPNLKDNIQRLADKDPAHRKIFVHGLGWDTTAETLTSVFG
KYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALREPQKKIGTRMTSCQLASAGPVP
APPPTAAAVPPVSEYTQRKIFVSNVATDLDPQKLLEFFSKFGEVEEGPLGLDKQTGKPKG
FCLFVYKSVESARRALEEPHKSFEGHTLHCQKAVDGPKHNKNYYQQHQQPQQHYPQHQQH
QQYYQHPAKKGKYSGGSGSGAAASAGHLMAPSGPAPVGFNPAVAPALGQALTALLATQGA
GLGIGNLLGGFSGPVNPQGVPPVMSNAGGYGAQGAGGGYGAQPMQYQNPQMQGGARPQGG
APYPGYGGH
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcgaagaagcgaaaaaccagagcttccgaagccaccgcacaaccagtagaagaagaa
cagcaaaatattaaacaagaatcagcagatctcgaacccgaacaagaacaagaacaagaa
caagaagagtaccaaaacgacaccgtagaagaagaagaagcagttcaagaggacgaagaa
gatccagagcccgaagaagaagatgataacgacaacggtgatgataatgaagaagaagag
gaagaaaatccaggatctggaaacaacgccgtgaatgaagttaacggaggcggtagtgag
gtgaagaaggaagaaggatgcgatgaagaagaggatttagaagatgagccactcgagaag
cttctagaacctttcacgaaggatcaacttacagcgcttataaaagaagctttagtcact
taccctaatttgaaggataatattcagagattggccgataaggatccagcgcaccgcaaa
atcttcgtgcacggcttgggttgggatactacagccgaaaccctaacgagcgtatttggg
aagtacggtgagattgaggattgtaaggctgttacggataaggttagtgggaagtcaaaa
ggatacgggtttattttgtttaagcataggagtggcgctaggaaagcattgagagaacca
cagaagaaaattggtactaggatgacttcttgccagctggcttcggctgggccggtccct
gccccgccccctacagcagcggctgtcccaccggtttccgagtatactcagaggaagatt
tttgttagcaatgtggcaactgatcttgatcctcaaaagctgttggagtttttctctaag
tttggtgaagttgaggagggtccacttggattggataagcaaactgggaaacccaagggg
ttttgtttgtttgtgtataagagtgtcgagagtgcaagaagggcgttggaggagccacac
aagagctttgaagggcatacacttcattgtcagaaggctgttgatgggccgaaacacaat
aagaattactatcagcagcaccagcagccgcaacagcattaccctcagcaccagcagcac
cagcagtattatcagcatcctgcaaagaaggggaaatattcaggtggtagtggcagtgga
gcagcagcatcagctggacatttaatggcgccatcagggcctgcacccgtgggattcaat
cctgctgtggctccggctcttgggcaggcattgacagccctgttagctactcaaggagct
ggtttggggattgggaatttgcttggaggttttagtgggccagtgaatcctcagggtgtg
cccccagtgatgagcaatgcgggaggatatggtgcccagggtgctggtggtggctatgga
gctcagccgatgcagtaccaaaatccgcagatgcagggcggtgcaagaccacagggtggt
gcaccttacccaggctatggaggtcactag

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