Nicotiana tomentosiformis: 104113830
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Entry
104113830 CDS
T05025
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03420
Nucleotide excision repair
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104113830
09124 Replication and repair
03420 Nucleotide excision repair
104113830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nto03051
]
104113830
03400 DNA repair and recombination proteins [BR:
nto03400
]
104113830
Proteasome [BR:
nto03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104113830
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104113830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
CUE
TECR_N
Dsc3_N
UBA_RAD5A
Ubiquitin_4
UBA_3
NQRA_N
Crinkler
Permuted_GreAB-C
DUF515
Motif
Other DBs
NCBI-GeneID:
104113830
NCBI-ProteinID:
XP_070051256
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Position
2:complement(36174021..36185862)
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AA seq
389 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDTVADVKKNIESVQGQDFYPAAQQMLIHQGKVLKDTATLE
ENKVAENSFVVIMLSKNKASSTGTSSSRAAPSDTAQPASSTGQAQARQTITAPQAPAASA
APPQSTSESATAPAPVPGDASTVTDVYDLAASNLVAGSNLEATVQQILDMGGGSWDRDTV
VRALRAAYNNPERAVDYLYSGIPEQAEIPPVAPTAAAPASGQAVNPSAQEASLPTVPSSG
PNANPLDLFPQGLPNVGSNAGSGNLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNP
HLMRLIQEHQPDFLRLINEPVEGEGNALGQMAGAIPQAVTVTPEEREAIERLEAMGFDRA
LVLEVYFACNKNEELAANYLLDHMHEFDE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtgaagactttgaaaggcactcactttgagatcgaagtgaaaccggaa
gacaccgttgcggatgtgaagaaaaacatagaatcagttcagggacaagatttctacccc
gctgcacaacagatgcttattcatcagggtaaagttctaaaggacactgcaacgcttgag
gaaaacaaagttgctgaaaatagtttcgtggtcattatgctttccaagaataaggcctca
tcaactggaacctcgtcttctcgagcagctccttcagatacggcacaaccagctagttcc
actgggcaagcccaagctagacagacaataacagcacctcaagctcccgctgcaagtgct
gcacctccacaatctacttctgagtctgctactgctcctgcccctgtgcctggtgatgct
agtactgtaacagatgtgtatgacctagcagcgtcaaaccttgttgctggaagtaacttg
gaggccacagttcaacaaattcttgatatgggtggtggaagttgggatagggatacagtt
gtgcgtgctttacgtgcagcatataacaatccggagagagctgttgactacttgtattct
ggtattcctgaacaagccgaaattccgcctgttgcccctacagctgctgctcctgccagc
ggacaggctgtaaacccttcagcgcaagaggcttcactacccacagttccttccagtggg
ccaaatgctaatcctttggatctgtttcctcagggtctaccaaatgtgggttcaaatgcc
ggttctggaaatttggattttctacgcaatagtccacagttccaggcccttcgagcaatg
gttcaagccaatccacaaatcttgcagcctatgctccaggagttgggtaagcaaaatccg
catttgatgcggcttattcaagagcatcaacccgacttcctgcgcctcatcaatgaacct
gttgaaggggaggggaatgcgctcgggcagatggcaggagcaataccacaagcggtgact
gttacacctgaagagcgtgaggctattgaacgtcttgaagctatggggtttgatcgagct
ttagtattggaagtatactttgcgtgcaacaaaaatgaggagctggctgcaaactatcta
ttagatcacatgcatgagtttgacgaatga
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integrated database retrieval system
