KEGG   Nicotiana tomentosiformis: 104113833
Entry
104113833         CDS       T05025                                 
Name
(RefSeq) probable splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104113833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nto03041]
    104113833
Spliceosome [BR:nto03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104113833
 Complex B
    104113833
 Complex C
   U2 SnRNP specific factors
    104113833
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 104113833
NCBI-ProteinID: XP_009622426
LinkDB
Position
10:80013166..80018024
AA seq 856 aa
MPFGVRLGFFPLFLALGFSQKSKQPLVATVHRLTPRRATPLLFKSSTGIEMLSTTPILPL
PAPPLDGNLGPTPPAQVVEEPKDDNMEENEEDTNKANNVSTSVATHTRTIGIIYPPPDIR
SIVDKTAQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAEARSQNQASGE
QPTQPADQEAAPAPPTADGAEATARPDPSVQFRPVRRVLEPPEAEQYTVRLPEGITGEEL
DIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKG
LTDKLRKSAADMTTVLERCLHRLEWEKSQEQARQKAEDEIEQERLQMAMIDWHDFVVVET
IDFADDEDLDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEVQLVEEGMRAA
TLQENGDVKSVETMAIPEEQDPPMRIVKNWKRPEERIPAERDPTKYVVSPITGELIPINE
MSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSN
AVKAEIEKKKEEPKQVIWDGHTGSIGRTASQAMSQNTNADDQNDAANDERNLPGPQAPPP
PRPGFPSVRPLPPPPGLALNIPRPPNTVQYSTSTSAGVAAPPRPPMVNMIPQVRPPPPPM
PQMLGQQNLMVNRPPMPPSVAMNSHGHPIPPPPGSQFTPLGAPRPFVPLPMSQPGMSMVP
PPPIPQGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEEQFLAQHSGPARINVSVPNTD
EGNLKGQVLEITVQSLSETIASLKEKISGEVQLPANKQKLSGKAGFLKDNLSLAYYNVAS
GETLSLSLRERGGRKR
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgccctttggagttaggctaggtttctttcccttgtttctagcgctaggtttctctcaa
aaatcaaaacagccgctggttgctacggtacaccgcctaactcctcggcgagcgactcct
ctcctcttcaagtcttcaacagggatagaaatgttgagcaccacgccaatattacccctt
ccagcgcccccgttggatgggaatctgggaccaacacctccagcgcaggtggtagaggaa
ccaaaggatgataacatggaggaaaatgaagaggacaccaataaagccaataatgtttca
acgtctgttgcaacacatactagaaccattggtatcatttatccgcctccagatattagg
agtattgtcgacaagactgcacagtttgtggcgaagaatggcccagaatttgagaagagg
attgttctaaataacgctggcaatgcaaaatttaacttcctgaatgcttctgatccttac
catgcctattatcagcaccgtttggctgaagctcgttcacagaatcaggcttctggagag
cagcctactcaaccagcagaccaagaagcggcccctgctcctcctaccgctgatggtgct
gaggcaactgctaggcctgatccgtcagttcagtttagacctgtcagaagggttcttgag
ccacctgaggcagagcaatatactgttagactccctgaagggatcacaggtgaagaattg
gatatcattaagcttacagcacaatttgtggccagaaatgggaagtctttcttaacaggg
ttgacgagcagggagattaataatccgcagtttcattttctaaagcctactcacagcatg
ttcatgtttttcacttcacttgcggatgcgtactcgaaagttctgatgcctcctaaaggc
ttgacggataagctgcggaagagtgccgctgacatgacaacagtcctggagcgatgtctg
catcgattggagtgggaaaagtcacaggagcaggctaggcagaaagctgaagatgagata
gaacaggagaggttgcagatggctatgattgattggcatgattttgttgtcgttgagact
atagattttgctgatgatgaagatctggatttacctccacctatgacccttgaggaggtt
ataaggaggagcaagatgcctacattggaggaagaagagtatgttgagcccggaaaagag
gtggaaatggagatggatgaagaagaggtgcagctagtcgaagaaggtatgagagctgcg
actcttcaagagaatggtgatgtcaagagtgttgaaaccatggcaattccagaggaacag
gacccacctatgcggattgtgaagaactggaagaggcctgaagagaggatccccgcagaa
agggacccaactaagtatgttgtctctcctataactggtgagctaatacctattaatgaa
atgtctgaacatatgaggatctctctcattgatccgaagtacaaggaacagaaagacagg
atgtttgcgaagattaaggagacaactcttgcgcaggatgatgagatttctaggaacatt
gttggacttgcaagaacccgtccggatatatttggtactacggaagaagaagtttcaaat
gcggtcaaggctgagattgagaaaaaaaaggaagagccgaagcaggtcatatgggatggt
cacacaggtagcattggtcgcactgcaagccaggcaatgtctcagaacactaatgcagat
gatcagaatgatgctgcaaatgatgaaagaaaccttcccggtccgcaggctcctccacct
cccaggcctggttttccatctgttaggccactacctccacctcctgggcttgcgctgaat
attcctaggcctcctaatacagtccagtattccacctccaccagtgctggggttgctgct
ccacctcgacctcctatggttaacatgattcctcaggttcggcccccacctcctcccatg
ccacagatgctaggtcagcaaaatctgatggtaaatcgtccaccaatgcctccatcagtg
gccatgaattcacatggccatcctattccaccacctcctggatcacagtttacacctttg
ggagcacctcgaccctttgttcccctcccgatgtcccagcccggaatgtctatggttccg
cctcctcctattccccaaggaatgcctcctcctcctccaccagaagaagcccctcctcta
cctgaagagccagagccgaagaggcaaaagcttgatgagtctgttctcattcctgaagag
cagtttttggctcagcactcgggtcctgcaaggatcaatgtatctgtgccgaatactgac
gaagggaatctcaaaggacaagttctggaaatcacagtgcaatctctgtctgaaaccatt
gccagtctaaaagagaagatttccggggaggtccagcttcctgcaaacaaacaaaagctg
agtggaaaggctggttttctcaaggacaacttgtctcttgcatactataatgttgcatct
ggagaaactctcagtctctctctgagagaacgtggtggcagaaagagatga

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