Nicotiana tomentosiformis: 104113877
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Entry
104113877 CDS
T05025
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nto03000
]
104113877
04121 Ubiquitin system [BR:
nto04121
]
104113877
Transcription factors [BR:
nto03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
104113877
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
104113877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
104113877
NCBI-ProteinID:
XP_009622484
LinkDB
All DBs
Position
3:135725936..135730158
Genome browser
AA seq
1122 aa
AA seq
DB search
MSFSSAQNNRRNNNSNRPRNTPVQSARREWVPRGSTATTTVSAAPVTTTVITTVVSPVFN
LNGSSSAGNGREKDNVSVAPVNHRNQTYVGPNYDKGPAYAGRERGRDRENHNHQENRVER
AVNGRINQGEHKRLKDPNLPQLVQEIQEKLLKGNIECMICYDMVRRSAPVWSCSSCYSIF
HLNCIKKWARAPTSVDTSAEKNQGFNWRCPGCQSVQLTSSKEIRYICFCGKRQDPPSDLY
LTPHSCGEPCGKKLEKELPGHDLSEEDLCPHVCVLQCHPGPCPPCKAFAPARSCPCGKEV
ITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGPCGHCQVIVNAYCFCKKKTEVVLC
GDMGVKGDIEIEDGVFSCNSACGRKLSCGNHVCLELCHPGPCGDCALLPSKVKTCCCGKT
SLEDERHSCLDPIPTCSKVCGKSLRCGVHRCQAVCHSGDCAPCLVPVTQRCRCGSTSRTV
ECYKTQAEDEKFTCDRPCGQKKNCGRHRCSERCCPLSNPKNSVTGGWNPHFCSMPCEKKL
RCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPSPSCQLPCSVPQPCG
HPPTHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACART
CHSSPCDFSAGPSNGSRASCGQTCGAPRRDCRHTCTALCHPSSPCPDVRCEFPVTITCSC
GRVSANVPCDAGGQIVDSVFEATIIHKLPSPLQPIEINGKKVPLGQRKLTCDDECAKMEK
KKVLSDAFGITPPNLEALHFGDAAVSEVLGDLLRRDPKWVLSIEERCKCLVLGRSRGGVN
ALKVHVFCPMLKEKRDAVRLIAARWKLSVNAAGWEPKRFITVHVTPKSKTPARILGAKGC
TVNNIAQPAVFDSLVDMDPRLVVALFDLPRDADISALVLRFGGECELVWLNDKNALAVFS
DPARAATAMRRLDQGSAYCGAAVVPQSGVASAVASATNAWGVSGAAKDGGGAAALKGNPW
KKAVVQEPHLRESPWDPEEWSKNPTDSAPSAWRTNEATPAASSNRWSVLAPEMTSNFPRA
SITIKEPVTEPGVGGSALPPKPQDVGVDEMADVVDDWEKAYD
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcatctgcacaaaacaatagaaggaataacaacagtaatcgtcccagaaac
actcctgttcaaagtgctcgacgtgagtgggtacctcggggatccacggccaccaccact
gtttcagctgcccctgtcaccaccacggtaattaccactgttgtgagccctgtgttcaat
cttaatggctcaagttcagctggaaatggaagagaaaaggataatgtgtcagttgcaccc
gttaatcatcgaaatcagacatatgtgggacccaattacgataaggggccggcgtatgcg
gggagagagaggggaagggacagggagaaccataatcatcaggagaacagggtggagagg
gcggtcaatgggaggattaatcagggcgaacacaaacggttgaaggaccctaatttgcct
caacttgtgcaagaaattcaggagaagctgttgaagggaaacattgagtgcatgatttgc
tatgatatggtgcggaggtctgcccctgtgtggtcatgttccagctgttactccattttc
catcttaattgtatcaaaaaatgggcccgagctcccacttctgttgatacgtctgcggag
aagaatcagggatttaattggcgctgtccaggctgtcaatcagtgcagctcacttcatcc
aaggagatccgatatatttgcttttgtgggaagaggcaagatcctccgtcagatttgtac
ttgaccccgcattcatgtggagagccctgtggcaagaaacttgagaaggagcttccaggg
catgatctgagtgaagaggatctgtgccctcacgtttgtgtcctacaatgccatcctggt
ccttgtccaccttgtaaggcatttgctccagctagaagttgcccctgcgggaaggaagta
attaccactcgctgctctgatcgcaagtccgttcttacctgcggacagcagtgtggtaag
cttcttgactgtgggcgtcatcggtgtgaacagacttgccatgttggtccttgtggccat
tgtcaagttattgtgaatgcctattgcttctgtaagaagaaaacagaggttgttctttgt
ggagacatgggtgtgaaaggagatatcgagatcgaggacggcgtcttttcatgcaattca
gcttgtggaaggaagcttagctgcggaaaccacgtctgtcttgagctctgccatccaggg
ccatgtggggattgtgccttgttgccaagcaaagtcaagacatgctgctgcggtaaaacc
agcttggaagacgaaagacacagttgtttagatccaattccaacctgttccaaggtctgt
ggtaaaagccttaggtgtggggtacatcgctgtcaagcggtgtgtcattctggtgactgt
gcaccatgtcttgttcctgtcacccaaagatgccgctgtgggtcaacttctcgaacagtg
gagtgttacaaaacgcaggcagaagatgagaagttcacttgtgatagaccttgcgggcaa
aagaagaactgtggaaggcaccgttgcagtgagcgatgttgccctctttctaatccaaaa
aattccgtcacaggtggttggaatcctcatttttgttcaatgccgtgtgagaagaagctt
agatgtgggcagcattcttgcgagtcactttgtcacagcggtcactgccctccctgcctt
gagacaattttcaccgatttgacttgtgcttgtgggagaacgtcaatccctcctccgcta
ccttgtggaacaccttctccttcgtgtcagttaccatgctcggttcctcagccttgtggt
catccacctactcacagctgccattttggagactgtctgccatgtgctgttcctgtagca
aaggaatgtgtaggcggacatgtaattttgaggaatataccttgtggatcaaaagacatc
agatgtaacaagctttgcgggaagaccaggcagtgtggcttgcatgcatgtgctagaact
tgtcattcatcaccatgtgatttttctgctggccccagcaacggctccagagcctcttgt
gggcagacatgtggtgctcctagaagagattgcaggcacacatgtacagctctttgtcac
ccctcttcgccatgtcctgatgtgagatgtgagtttcctgttactattacttgttcttgt
ggccgggtctcagcaaatgttccttgtgatgctggaggtcagatcgttgattctgttttt
gaagctactataatccacaagttgccttcacctcttcaacctattgaaataaatgggaag
aaggttcctcttggtcagaggaagcttacttgtgatgatgaatgtgcaaagatggagaag
aaaaaggttctttctgatgcttttggtataactccgccgaatttggaggccctccatttt
ggtgatgcagctgtctctgaagtgctaggggatcttcttaggcgtgaccctaagtgggtt
ttgtccatagaagaaaggtgcaaatgtttggtccttggcaggagcagaggcggggttaat
gcgctcaaagttcatgttttttgcccaatgttgaaggaaaagcgggatgcagttagactg
atagctgcaaggtggaagctttcagtgaatgcagctggttgggaacccaagagattcatc
actgtgcatgttacacccaagtccaaaactccagcgcgtatacttggtgccaaaggttgt
actgtcaataacattgctcagcctgctgtttttgattctctggtggatatggatccgagg
cttgttgtggctttgtttgacttgccaagagatgcagacattagtgcgttagttctcagg
tttggtggtgaatgcgagcttgtctggttaaatgacaagaatgccttggctgtgttcagt
gatcctgcccgagcagcaacagctatgaggaggctagaccaggggtcagcttattgtggt
gctgctgtagttcctcagagtggtgttgcatcagcagtggcatccgctactaatgcttgg
ggagtctccggagcagccaaggatgggggaggagcggcagctcttaagggtaatccatgg
aagaaggctgtagtccaggagcctcatttgagggagagtccatgggatcccgaagaatgg
tccaagaatcccactgattcagccccttctgcctggaggacaaatgaagcaacacccgct
gcctcgtctaataggtggagtgtcttagcgcctgaaatgacttccaattttcccagggcg
tctattacaatcaaggaacctgttactgagccaggagtgggtggttcagctttgcccccc
aaacctcaagacgtgggggtcgacgagatggcagatgtagtggatgattgggagaaggct
tacgattga
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