Nicotiana tomentosiformis: 104114018
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Entry
104114018 CDS
T05025
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104114018
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104114018
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104114018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-RING_16
zf_RING_Vps8
zf-RING_UBOX
zf-C3H2C3
Prok-RING_1
zinc_ribbon_16
Prok-RING_4
zf-RING_Vps41
PHD_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
104114018
NCBI-ProteinID:
XP_009622651
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All DBs
Position
4:60518592..60526930
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AA seq
331 aa
AA seq
DB search
MENSKSNNNNNEAAAAAKSTTAIAEAADANNQQRVNPDGGNWPYGDSSSQVVEINANGES
GVSAAVDSNGGASRRTPFTNLSQEDADLALARTLQEQERAYMMLSMNGDGIDFGSWDGGS
YDHDEEDDEDFDDPSEEDEDDSNVDEDEEDGEDAFDVHAHDEAGEDENQGIELDPSAFSS
DEAYARALQDAEEREMAARLLALAGINEMYVGQAQDREDRGINSQDAWEDVDPDELSYEE
LIALGEVVGTESRGLSADTIASLPSVNYKAQTASEGTTDSCVICRLEYEDGDQLTVLSCK
HSYHSECLNNWLQINKVCPMCSTEVSTSGNS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcaaaaagtaataacaacaacaacgaagcagcagcagcagctaaaagcaca
accgccatcgcggaggcggccgatgccaacaaccaacaacgagtaaaccccgatggcggc
aattggccatatggggatagtagttcgcaagttgtggaaatcaatgcaaatggggaatcg
ggtgtttctgctgctgtggatagtaatggcggagcttctcgaagaactccgttcaccaac
cttagtcaggaggatgctgatcttgctctcgcccgcactttacaagagcaggaaagggct
tatatgatgcttagcatgaacggtgacgggattgatttcgggagttgggatggtgggagc
tatgaccatgatgaggaggatgatgaagattttgatgatccaagcgaagaagatgaagat
gatagtaatgtagatgaggatgaagaagatggagaagatgcattcgatgtgcatgctcat
gatgaagctggcgaggatgagaaccaagggattgagttagacccatcggctttttctagt
gatgaggcctatgccagagcattacaagatgccgaagagagggaaatggcagcaagatta
ttggcccttgccgggataaatgaaatgtatgttggacaagctcaagatcgagaggatcgt
ggtattaattcccaggatgcatgggaggatgttgatcctgatgagctttcttatgaggaa
cttatagcactgggtgaagttgttggaactgagagcaggggtctttctgctgatacaatt
gcctctttgccttcagtgaactataaggcacaaactgcatcagaagggaccactgattcg
tgtgttatatgtagattggaatatgaagatggtgaccaattgactgtgctatcctgcaaa
cattcttatcattctgagtgtctgaacaattggttacaaataaacaaggtctgtccaatg
tgtagcactgaggtctccacctccggaaacagctag
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