KEGG   Nicotiana tomentosiformis: 104114345
Entry
104114345         CDS       T05025                                 
Name
(RefSeq) cullin-3A-like isoform X1
  KO
K03869  cullin 3
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104114345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nto04121]
    104114345
   03400 DNA repair and recombination proteins [BR:nto03400]
    104114345
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     104114345
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104114345
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 WAC_Acf1_DNA_bd DNA_repr_REX1B DUF4962 HTH_IclR
Other DBs
NCBI-GeneID: 104114345
NCBI-ProteinID: XP_009623064
LinkDB
Position
2:complement(92738922..92743416)
AA seq 733 aa
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVSTMTSHLKEIAKSIEAAQGGLFLEELNRKWAEHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDHIIHSSKIQKRLQDTLLELVQHERTGEVINRGLMRNV
IKMLMDLGSSVYQEDFEKPFLEVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVS
HYLDAKSESKITNVVEKEMIESHMHRLVHMENSGLVNMIVDDKYEDLGRMYNLFRRVPTG
LALIRDVMTSHIREIGKQLVTDPERLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNA
LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEIVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHA
AVGAEITDGPSLTVQVLTTGSWPTQSVTTCNLPPEILGVCDKFKTYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQATEIPASDLKRCLQS
LACVKGKNVLRKEPMSKDIVEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLNSRFLPNPVVIKKRIESLIEREFLE
RDKTDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtgcacagaagaagagaaatttccagatagaggcgtttaagcatcgggtcgttgtg
gatccgaaatatgctgaaaaaacatggaagatcctagagcatgcgattcatgagatttac
aatcacaacgccagtggtcttagtttcgaagagctctatagaaatgcatataacatggtc
ctacacaaatttggggagaagctctattcaggacttgtatcaactatgacatcacatttg
aaggaaattgcaaaatctattgaagctgctcagggaggtttgtttctggaagaactgaat
cgaaaatgggcagagcataacaaggcattgcaaatgattcgagatattttaatgtatatg
gatagaactttcattcccagtacacataaaacacctgttcatgagcttggtttgaattta
tggagagaccatatcatccactctagcaaaatccagaaaaggcttcaggacacacttctt
gaacttgttcagcatgagaggactggtgaagtgataaacaggggtttgatgaggaatgta
ataaaaatgctaatggatttaggttcttcagtataccaagaagactttgaaaagcctttc
cttgaagtctcagcagatttttatcggcttgagtctcagcaattcattgagtgctgtgat
tgtggggattatctgaagaaagctgagaaacgtctcaacgaagagattgaaagagtgtcc
cactatttggatgcaaaaagtgaatccaaaattactaatgtggtggagaaagagatgatc
gaaagccatatgcacaggttggttcatatggagaactcaggcttagtgaatatgatcgta
gatgacaagtatgaagatttaggaaggatgtacaacttgttccgtagagtgccaactgga
cttgcactgattagagatgtcatgacttctcatattagagaaattggtaagcagcttgtc
actgatccagaaaggttaaaggatcctgtagactttgtgcagaggcttttggatgagaag
gataagcatgataagatcataagttcagcatttaacaatgacaaaacattccagaatgcc
ctcaattcctcatttgagtactttattaatctgaatccacgatcaccagagttcatttcc
ttatttgtggatgacaaacttcggaaagggctgaaaggggttactgaggaggatgtagag
attgtattggataaagtgatgatgctttttcgctaccttcaggagaaagatgtgtttgag
aagtactacaagcagcacttggcaaagagacttctctcaggcaagacagtatctgatgac
gctgagagaagtttgatagttaagcttaaaacagaatgcgggtaccagttcacatcaaaa
ctggaaggcatgtttactgacatgaagacctcacaagatacaatgcagggttttcatgct
gctgtgggtgctgagatcacggatggtccttcactcacagtccaggtccttactactggg
tcctggccaacacagtccgttactacttgcaatcttcctcctgaaattttgggggtctgt
gataagttcaagacatactatctcggcactcatacaggtaggaggttgtcatggcagaca
aatatggggactgctgatttgaaagctacatttggaaagggacaaaagcatgaacttaac
gtttccacttaccagatgtgcatccttatgctgttcaacaatgctgatcggttgagttac
aaagaaattgagcaggctacagaaataccagcttcagatttaaagaggtgcttacaatct
cttgcatgcgttaaggggaagaatgttttgaggaaggaaccaatgagcaaggatattgtt
gaggatgatgctttttacttcaatgataaattctctagcaagttctacaaggtaaagata
ggtactgttgttgcacaaaaggagtcagagcctgaaaaacaggagactagacaaagagtg
gaggaggaccggaaaccacagattgaggcagcaatagtcagaatcatgaaatctcggagg
gtgctcgatcacaacaatatagttgctgaggtcacgaagcagctaaattctcgcttcctg
ccaaacccagttgtcataaagaaacgaattgagtctttgattgagcgggaattcttggag
agagataaaacagataggaagttatatcgttacctggcttga

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