Nicotiana tomentosiformis: 104114504
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Entry
104114504 CDS
T05025
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104114504
03015 mRNA surveillance pathway
104114504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104114504
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104114504
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104114504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104114504
NCBI-ProteinID:
XP_070051022
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All DBs
Position
2:complement(4672942..4691084)
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AA seq
508 aa
AA seq
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MANSSSTASSTAAFVADSSSTSSSTAASTTANPRETRSWADEADEIDQAEQSEKASAEPE
IGSLQIDESKRVNNSTLDDPEDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKF
ERPSKIQEISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKIRAPQALCICPTR
ELAIQNMEVLLKMGKFTGITSELAIPADAANYIPISKRPPVSAQVVIGTPGTVNKWVTAR
KLGMSCMKILVFDEADHMLAESGFQDDSIRIMKAIVKASADCQVLLFSATFGESVKAFVT
KIVRDLFVKDYNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIF
VRTRNSASMLHTSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQ
SQVNLVVNYDLPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCDDRDNMLMSKIEN
HFNSQVTEIASWKSEEDFENALKKAGLL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctaacagttctagtaccgccagtagcactgccgctttcgtggctgacagttctagt
acttctagcagcaccgccgcttctacgacggcaaacccacgagaaaccagaagctgggca
gacgaagctgacgagatagatcaagccgagcagtctgaaaaagctagcgccgagcctgaa
atcggatctctacaaattgacgagtccaaaagagtcaacaactccactcttgatgatcca
gaagattccagaatagaagccgttacatctggcgacacgttgtacaaatcagcgaagaga
tttgaggatttaaacttgtctcctgagttattgaaaggattatatgtagagatgaagttt
gagcgacctagcaaaattcaagagattagtttacccatgattcttacgccgccctacaag
aatcttattgctcaagctcataatggctctggtaaaactacttgctttgtgcttggaatg
ttgagtcgggttgatccgaagattcgtgcccctcaagctctctgtatttgtccaaccaga
gaattggctattcagaatatggaagtgttgttgaagatggggaagttcactggtataaca
tcagaattagctatcccagcagatgcagccaactacataccaatttcaaagcggccacct
gtttcagcacaagtagtaattggcacacctggaactgtaaataagtgggtgacggcaagg
aaactgggcatgagttgcatgaagattcttgtatttgatgaagcggaccacatgttggca
gagagtggttttcaggacgattccataagaataatgaaggcaattgtcaaagccagcgcc
gactgccaggtgcttctgttttctgcaacgtttggggaaagtgtcaaagcatttgtgaca
aaaattgttagagatcttttcgtgaaagattataaccagatgtttgtgaagaaagaagaa
ctttcgctggattcagtgaagcagtataaagtgcagtgtccggatgaactttcaaaagtc
atggtgattaaagacaaaatacttgaactaggacagaaggtggggcagacaattatattt
gttcgtacaagaaacagtgcgagtatgctgcatacatcattggtggactatggctatgaa
gtgacaacaattcaaggggctcttaagcaagaagatagagacaaaataatcaaggagttc
aaagaaggattgacacaagttcttatatcaactgatcttcttgctcgtggatttgatcaa
tcgcaggttaatttggtggttaattatgatctccctgtgagacatgagagtccatcagag
ccagatcatgaggtatacttgcatcggattggtagagcagggcgttttggccgcaaaggt
gccatattcaacttgctctgcgatgaccgagacaacatgctgatgtcaaagattgagaac
catttcaacagtcaagtgactgagatcgcctcatggaaaagtgaggaggatttcgagaat
gctctgaagaaagctggcttgctctaa
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