KEGG   Nicotiana tomentosiformis: 104114520
Entry
104114520         CDS       T05025                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nto03400]
    104114520
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104114520
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4_3 zf-C3HC4 DEAD zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-C3HC4_4 ResIII Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-RING_4 zf-ANAPC11 CUE GIP1_N UBA
Other DBs
NCBI-GeneID: 104114520
NCBI-ProteinID: XP_009623281
LinkDB
Position
9:109212419..109221577
AA seq 1183 aa
MEMEAKVESENEKKIKMIKSIIGSEITEKAILEALSQQNNNPDAAINHLLDSSPPSAVHK
TVTSTGVRISHMVKQENVEESVGCGTVHGLKVKEEPDVVIDEKGLEVEEKKVLDGYESKG
SVGKCDLSFDGEEMVNGLKVKEEPDMGIEEKGLKVEEKKVLDDYQSKGSVGKWDLSFDEW
LKLPENNPEIDTQKPKEEKKLEIMKVKEEQQDVLCVEPLSARPLSKQEYNSLKNSNVANG
AKQEYNRLKSSSNVAICVNMEKMGIKKNMLSTVVIEDGDFPEDLDWLLVGRTIVTGLSTT
KGRKLENNEIVHFAFPQQGNSKCSSQWGGSRAAAAAAASSIVRFSTKRFGEIGRLPMEWA
KCLIPLVNSSKVKVHGRCVAAPVTLQLMQELMLYVSFYIHQSVFTSCDKSSWKLDSPSQI
DTTTYPLLTLFKLLKVKPFQNAEFTPDELYSCKRQLNLECDSNEAASVLPIAKRRNGCQQ
YSEQNKDEHDISEASFNKLVGSVDMYDLKEMDAPDTLMCCLRPYQKEALYWMSESEKGSD
VEETSKTLHPCWAAYRICEERKIYVNIFSGEATTEFPTASKSARGGILADAMGLGKTVMT
IALILARLGRGSSLDDQEFVSDDADETVYITKRLTDTDTEVSRKAKGGTLIVCPMALLGQ
WKDELEAHSKPGSVSVFVHYGGDRSNDPKVIAEQDVVLTTYGVLSATYKADRENSIFHKV
DWYRVVLDEAHTIKSWKTLGAQAAFTLSAHCRWCLTGTPLQNNLEDLYSLLCFLHVEPWC
NWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIQC
IQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRSDT
QEFADLDKLARRFLETNPDSTTQKAPTPAYVEEVVEGIRYGENTECPICLESADDPVLTP
CAHRMCRECLLSSWRTPTSGLCPICRQMLRKNELFTCPSENRFRIDVEKNWQESSKVSKL
LECLESIRKTGCGEKSIVFSQWTSFLDLLEIPLKRKKIGYLRFDGKLVQKQRERVLKEFS
ETNEKTILLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKNTVRVRRF
IVKDTVEERMQQVQGRKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3552 nt   +upstreamnt  +downstreamnt
atggaaatggaagcaaaggtagaatcagagaacgagaagaaaataaagatgatcaaatca
atcatcggttctgaaattacagaaaaggccattcttgaagccctttctcaacaaaacaat
aatccagatgcagccattaaccacttgctcgattcttcgccgccatcagcggttcacaag
actgttactagcactggagttaggatttctcatatggtaaaacaagaaaatgttgaagaa
tcagtgggctgtggaacagttcatgggctaaaagttaaagaagaacctgatgtggttatt
gatgaaaaagggctagaagtggaagaaaagaaggttcttgatggttatgaatcaaaaggg
tctgttggtaaatgcgatttgagctttgatggtgaagaaatggttaatgggctaaaagtt
aaagaagaacctgatatgggtattgaggagaaagggctaaaagtggaagaaaagaaggtt
cttgatgattatcaatcaaaaggatctgttggtaaatgggatttgagctttgatgaatgg
ttaaagttgcccgaaaacaatccagaaatcgatacacagaagccgaaagaagaaaagaaa
cttgaaatcatgaaagttaaagaagagcaacaagatgtactttgtgttgaaccattgtca
gcaaggcctttatcaaaacaagaatacaattccctgaaaaacagtaatgtggctaatggt
gcaaaacaagaatacaacagactgaaaagtagtagtaatgtggctatttgtgtaaatatg
gaaaaaatgggaattaagaaaaatatgcttagtactgttgtgatagaagatggagatttt
cctgaagatcttgattggttattagttgggaggactattgttactgggctttcaactaca
aaagggagaaaattggaaaacaatgaaattgttcattttgcttttcctcaacaaggaaat
agtaagtgtagttcacaatggggtggatcaagagctgctgctgctgctgctgcatcttcc
attgttagattctcgacgaaaagatttggggagattgggcgtctcccaatggaatgggca
aaatgtctcattccacttgtaaattcttcaaaggtaaaggttcatggccgatgtgttgct
gcgcctgtaactctgcagctaatgcaggagcttatgttgtatgtaagtttctacattcac
cagtcagtgtttactagctgcgataagtcatcttggaagctggattctccctcacaaatt
gataccacaacatatccactacttactttgttcaagttactcaaagtcaaaccatttcaa
aatgctgagttcactccggatgaactttattcttgtaaacgtcagctcaatttagaatgt
gattcgaatgaggctgcttcagttttaccaatagcaaaacgaagaaacggctgccagcag
tattcagagcaaaacaaggatgagcatgatatctctgaagcatcgtttaacaaacttgtt
ggttctgtagacatgtatgacttgaaggaaatggatgctcccgatacacttatgtgctgt
ctaaggccttaccagaaggaggctctttactggatgtcagaatcagagaaaggaagtgat
gttgaggaaacatctaaaactcttcatccgtgttgggcagcatatcggatatgtgaagag
aggaaaatttatgttaacattttctctggggaagcaacgacagaattcccaacagcatca
aaatcagcacgaggagggatattggcagatgcaatggggctcggaaaaacagtgatgaca
attgctttaattcttgctagactgggcaggggtagtagccttgatgatcaagaatttgtt
tcagacgacgcagatgaaactgtatatataactaaaaggctcactgatactgatacagaa
gtctcaagaaaggcaaaaggtggcactctcattgtctgtcccatggcattactaggccag
tggaaggatgaacttgaagcacattcaaaacctggtagcgtttcagttttcgttcattat
ggtggggacagaagtaatgaccctaaagtgatagcagaacaagatgtagtcctaacaact
tatggtgtcttgagtgcaacttacaaggctgatagggagaatagcatatttcataaagtt
gattggtaccgcgttgttctggatgaggcacacaccataaaatcttggaagactctcggt
gcacaggctgcctttactttgtcagcgcattgtaggtggtgtcttactggtactcctctt
cagaataatttggaggacctttacagccttttatgtttcttgcacgtcgagccatggtgc
aactgggcatggtggaacaagttaatacagcgaccttatgaaaatggtgatcaaagagct
ttaaaattgatcaaagccattttaaggccacttatgttgagaagaacaaaggataccaag
gacaaagaaggaaggccgattcttgttctccctccaactgatattcaagtcattcagtgt
atacaatcagaagccgaacgtgacttctacgatgccctcttcaagagatctaaagttcaa
tttgatcagtttgtggcacaaggaaaagttcttcacaactatgctaatattctcgaatta
ctacttcgattgaggcagtgttgcaatcatcctttccttgttatgagtcgaagcgataca
caagaatttgcagacttagacaagctagcaagaagattcttggaaacaaatcctgattct
acaacacagaaagcacctacaccagcatatgtagaagaagttgttgagggaattcgttac
ggcgaaaatacagaatgtccaatatgccttgagtcagcagatgatcctgtgttaacacca
tgtgctcacagaatgtgcagagaatgtctactttcaagttggagaactccaacaagtgga
ctttgtccaatttgtagacaaatgctaaggaaaaatgagctatttacatgtccatccgaa
aatcggtttaggattgatgttgagaagaattggcaagagtcttctaaggtttcaaaactg
ttggaatgtttagaatcaataagaaaaacaggctgtggtgaaaagagtattgtttttagt
caatggacttcatttcttgatcttttggagattccacttaagagaaagaaaattggttat
ttgaggtttgatgggaagttggtgcaaaaacaaagagaaagggtcttgaaagagttcagt
gagactaatgagaaaacaattttgttaatgtcactaaaagctggaggtgtgggcttgaac
ttaacagcagcttctaatgtcttcctcatggatccatggtggaatcctgcagtagaggag
caagcaataatgagaattcatcgtattggtcaaaagaatacagttcgtgttagaaggttc
attgttaaggacacagtagaagaaagaatgcaacaagtacaaggaagaaagcaaaggatg
atagctggagctttgactgatgaagaagtacgttcggctagacttgaagaactcaaaatg
ctttttcgatag

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