Nicotiana tomentosiformis: 104114533
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Entry
104114533 CDS
T05025
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104114533
Transcription machinery [BR:
nto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104114533
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_31
Peptidase_S30
Motif
Other DBs
NCBI-GeneID:
104114533
NCBI-ProteinID:
XP_009623296
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Position
8:complement(93478261..93484356)
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AA seq
572 aa
AA seq
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MHIKFQVFLLHSQNLLAMGFRLYLKWGFSVQPPFSSNSSSWPSSHSFKGKEALYDPARSL
KPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNV
ISLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHT
CLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNAN
DIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSI
LEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVA
FEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAI
NQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVM
ELTPDKSIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRLY
GVSKEWIRRIERRALSKLRSADCFQDLTHYSV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcaaattccaagtctttctcttgcattcacaaaaccttttggctatgggtttt
aggctgtacctcaaatggggtttctctgtccaaccccctttctcctccaactcatcatca
tggccttcttcacattctttcaaaggaaaggaggctttatacgatccagctcggtctctc
aaaccttttatcaatgaggactgtgaaccttcacatagtgatcctttcagagtgcggact
tgtttatctgacccccaactgtggactagtgatacatcagtaactacagaaataaagacg
cgaatcggcagaggatcccctaccaatatatatggagatattggcagtcctaagaatgtg
atatcacttgatggggagaaaccaacatatttaaacacaaccagagctcttcattttagt
ttactgatgaaaaatcttgatctgctggaaaacatgtttgctgattcagaggtgtcaaga
ttagaaagagatattatggtgcagctagacaagcttggagctttagaattctttcatact
tgtctctcaaggacaaatcattgttctacttttcctgaagtgcttgacgtgccaagggag
cttattgaagaaattgaaaaagatggccttgttggaaatggtatagataaggtagtcgta
cgttctaaaaaaaagcaagagcggaagtcaagaagaaacagagcatccagaaatgctaat
gacattattacagtgcagccacataccaaaaacatccaggaggatttgcagcagccaaag
tttttttctggaaaaagaacacatacctctagaaataaaagacagaaaattgctaagaat
gaggcagaaatgtcaagaggtgttaagctggtagcagaattggaaagaatcaggtcaatc
cttgaagaagaaactggtcgagtagctagtttcagtagctgggcagaagctgctggagtt
gaacagaaggagttgcagcagcgcttgcattttggttggtattgcagggatgagcttctg
aaaagtacacgatccttagtcttatatctggcaagaaactacagggggcttggagtggca
tttgaagacttaattcaggctgggaacatgggtgtgctacaaggtgctgtaagatttgac
gacactaggggatacaaattctcaacttacgttcagtattggataagaaaatcattgtca
aaattggtggcccagcatgctagaggaatccgaattcccttcactatatgcaaagcaata
aatcaaatacataaagctcgtaaagctctcagtaggagccacggaaaatttccaggtgat
gatgaaattgccaagtacacgggtctatccacggctaggattgcaatggctagtaaatgc
ctgagagttgtgggttcaattgatcagaaagttggagattgcatcagtgcaaaagttatg
gaactcacaccagataaatcaattataagcccggaggaaactgtcattagggaagacata
atagacaacatgtatgctcttttggaaagcttggatccaaaagagcagcaagtagtatat
tttaggtttggtcttgaaaatcatcagcgcaaatccctcgaggagattggtaggctttat
ggagtaagtaaagagtggattaggagaatagaacgaagagctctctcaaaattaagaagc
gcggattgtttccaagatttaactcattactctgtatag
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