Nicotiana tomentosiformis: 104114612
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Entry
104114612 CDS
T05025
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104114612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104114612
Enzymes [BR:
nto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104114612
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104114612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
104114612
NCBI-ProteinID:
XP_009623390
LinkDB
All DBs
Position
1:complement(1824150..1844445)
Genome browser
AA seq
1185 aa
AA seq
DB search
MEDQNEGKNKAMSRPHLLQEKDYSALKELFSHHIESFDHMVDNGLETMLLNIKPVEVLDS
FSKLKLRIWFGKPEIFPPQKERTSKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAV
IREKFNFGQFPIMLKSKLCHLRAADDSKKLTAHKEEPSEMGGYFILKGLERVIRLLILPK
RNYPMSMVRNSFRDRREGYSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYL
LPVGIILKALVDTTDHEIYVNLTCCYNEEYDRVKGAVGTQLVGERAKIILDEVQALSLFT
RAQCLQHIGEHFQPVMTGMQNYSYNTVADAVLRDYIFVHLDNNHDKFNLLVFMLQKLFSL
IDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRLQRMLQEETDGEKKKFELSSL
ADVKKTIEKNAPKQMSLAIENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRA
VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDLKGNIK
DFFKIRESILRVLTTIGMIPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRR
LKVSAISIPVDLEVGYIPLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPF
EQVYMEISCPDGGDGGRKNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGK
QTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDM
EDAMVLNKSSVDRGLCHGHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGL
PYVGQRINPHEPYCTIYNEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRS
RNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESI
AAKGGALHGKFVDATPFSNTMKDAESESSSLVDELGSMLTASGFNYHGVEVLYSGVYGTE
LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSLLA
HGAAYLLHDRLHTSSDHHIADVCSECGSILTASLIQPPKQKMQEEMRKISGLPPAREPKK
VTCLACRTSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNGAGA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccaaaacgaaggaaagaataaggcgatgtcacggccgcatttgttgcaagag
aaagattactcagcactgaaagagctgttcagccaccatattgagtcctttgatcatatg
gtcgataatggtcttgaaaccatgctcctcaatatcaagcccgttgaagtcctcgattcc
ttttccaagctcaagctaagaatctggttcggcaaacctgaaatattcccacctcaaaag
gaacgaacttccaagaccatgcatgatgctctgtatccttttgagtgtcgacaagctaaa
ctttcatatacgggaaagtttttggtggatatttgcttccagtatggagatggagcagta
atcagagagaaatttaattttgggcagttccctatcatgttgaagtcaaaactatgtcat
ctgagagctgctgatgactccaaaaagttaactgctcacaaagaagaaccatcagaaatg
ggcggatatttcattcttaaagggcttgagagagtcattcgccttctaattttgccaaaa
cgaaactatccaatgagtatggtacggaattcatttcgtgatagacgtgaagggtattcc
gataaagctgtcgttataagatgcgttagagaagatcagtctgcagtctcagttaaattg
tattatctaaataatggaagtgcaagacttggattctggatacaaggaagggaatacttg
cttcctgttggtatcatattaaaggccctcgttgacactactgatcacgaaatatacgtc
aatttaacatgttgctacaatgaggaatatgaccgagtaaagggagctgttggcacccag
cttgtcggtgaaagagcaaaaattattctggatgaagttcaagctttatctcttttcacc
cgagcacagtgcctccaacatattggggagcatttccaacccgttatgacaggaatgcaa
aattatagttacaatactgttgctgatgctgtgctaagagactacatatttgtccatctg
gataacaatcatgataaattcaatctacttgtctttatgttgcagaagcttttttctctt
atagaccagacttctgtcctagacaatccagactctctgcaaaatcaagaagttttgctg
ccgggtcacttaattactatttatctcaaggaaaagctacaagattggctgcttagatta
caaaggatgcttcaagaagaaactgatggtgaaaaaaagaagtttgagctaagtagcttg
gcagatgtcaagaagactattgaaaaaaatgctcccaaacagatgagcttggctattgag
aacatgttaaagactgggagattggttacacaatcaggtcttgacttgcagcagagagct
ggtatgacagttcaggcagagaggttaaatttcctccgtttcctttcacatttccgagca
gttcatcgaggtgcctcatttgctggccttcgtacgacaagtgtgcggaagttgttgcct
gaatcttggggtttcctttgtcctgttcacacacctgatggggagccatgtgggttgctt
aatcatatgactgcatcttgccgcatcacgtcatactatgatttgaagggaaatattaaa
gacttcttcaaaatccgggagtccatattgcgcgtgttgactacaattggaatgatacca
tcagcgccaaagcttgtgaaaggtggcccccctgaagagctgtctgtcctactggatggt
cgtattgtgggcagtatgcgatctgataaaattgaagaagctgttacatacttgcgaaga
ttgaaagtgtcagcaatatcgatcccagttgatttggaggttggatacatcccgttgagc
atgagtggagcatatcctggtctatatctgttcacatctccttctaggtttgttcgtccc
gtaagaaatatctctgcgcctgctgaagagggcaatgatcttgaactcattggacccttt
gaacaggtgtatatggagataagctgcccggatggtggagatggaggaaggaaaaatgta
ttccctgccacacatcgagaaattcatccaactaatattttgagtgttgttggcaatctt
acaccttggtctgatcataatcaaagtccacgtaatatgtatcagtgtcagatgggtaaa
caaacaatgggtttctcctcgcaagcattaaactgtcgtgctgatcaaaagctatatcac
cttcagactcctcaaactccaattgtacgcacaaaagcttatgagaagtactgtgttgat
gactatccattaggaacaaatgcaattgtggcagttttggcttattcaggatatgacatg
gaggatgccatggtcttaaataaatcatctgtagatcgtggtttgtgtcatgggcatata
taccagacagaaacaattgacttgactgagcaaagcgccaaatctgatcgtgctcaaagg
gtgtttagaagaagctatttggataagtcatctcatcagctgattgattctgatggtctt
ccatatgtggggcagaggattaatccacatgagccatattgtaccatttacaacgaaata
accagtcagacaactaacatgaagttgaagggttcagagcctgttgttgttgattatgtt
gctgtcgatgtaaaaaataaaacgcatctgcagaaggcaaacatacgttttagacgctcc
aggaatcctgtaattggtgataaatttagcagccgacatgggcaaaagggtgtttgctct
caattatggcctgatattgatatgccattctcaggtgttacaggaatgaggccagatctt
attattaatcctcatgcattcccttcaaggatgacgattgctatgctattggagtcaatt
gctgctaagggaggtgctttacacggaaagtttgtcgatgcaacaccattttctaacaca
atgaaggatgcagaatcagaatccagttcactggtggatgaacttggttccatgttaaca
gcttctggcttcaattaccatggtgtagaagtactatatagtggagtatatgggacagag
ctgacttgtgaaatatttattgggcctgtttattatcagcggctacggcacatggtttcc
gataaatttcaggtccgttctactggaacagtagaccaggtcacgcggcagcccatcaag
gggagaaagcgtggtggaggtatccgctttggagaaatggaacgagactcactccttgct
catggagcagcatatttgctgcatgatagactccataccagctcagatcatcacattgca
gacgtgtgttctgaatgtggaagtatcctaacagcgtcactaatccagccgccaaaacaa
aaaatgcaagaagaaatgcggaaaattagtggtctgccacctgctagagaacccaaaaag
gtaacttgtcttgcttgccggacaagtaaaggaatggagactgttgcaatgccgtacgtg
ttcaaatatctagcggctgaactggcagccatgaacatcaagatgaccctcaaactaagc
aatggggctggagcttga
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integrated database retrieval system
