Nicotiana tomentosiformis: 104114774
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Entry
104114774 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104114774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104114774
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104114774
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
104114774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104114774
NCBI-ProteinID:
XP_009623590
LinkDB
All DBs
Position
12:complement(4364594..4368561)
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AA seq
288 aa
AA seq
DB search
MVGLSIGEKNFIKGGIAQDMRNDGRKRLAYRQIYVETGVIPQANGSARIKLGPTDVIAGV
KAELGKPSQAHPDQGKIYIHVDCSPTAEPSFEGRGGEELSAELTAALEGCLLGGKSGAGA
GIDPSSLSIKEGKVCWDLYIDCLVISSGGNLLDALGAAIKAALSNTGIPRVQVREAASSD
EQADVDVSDEEFLQFDTSGIPVIVTLIKVGRHYIVDATSEEESLMNSAVSISVNRQGLVC
GLTKRGGTGLDPSVILDMISVSKHVSEQLIDKLDSEIEAAEKAHEDEP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggtagggctatctattggagaaaaaaactttatcaaaggtggtattgcccaggatatg
cgcaatgatggtagaaaacgacttgcttatcgacaaatttatgtggaaacaggtgttatt
cctcaggcaaatggatctgcacgaatcaagttgggtccaactgatgttattgccggtgtc
aaggcggaacttggaaaaccaagtcaagcgcatcctgaccaagggaaaatttatattcac
gtcgattgcagtcccacagcagagccatcgtttgagggcagaggaggcgaggaattgtcc
gcagaactcacagctgcacttgaggggtgtcttttgggtggtaaaagtggagcaggggct
ggaatagatccgtcatctctctcaatcaaagaaggaaaagtatgttgggatctgtatatt
gattgccttgtcattagttctggcgggaatcttctcgacgcactaggtgctgcaatcaag
gctgcactgagcaatacgggtattccgagagttcaggttcgtgaagctgcttcatccgat
gagcaggcagatgtggatgttagtgatgaagaatttctgcaatttgataccagcggaata
ccagtcatagttactttgataaaggttggaaggcactacattgttgatgcaacttcagag
gaggagtccctaatgaactcggctgtttctatttctgttaatagacaagggctagtatgt
gggttgaccaaacgaggaggcaccggattagaccctagtgtcatacttgacatgatatct
gtgtcaaaacatgtaagtgagcagctaatcgacaagcttgattcagagatagaagctgct
gaaaaagctcatgaagatgaaccatga
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