Nicotiana tomentosiformis: 104114880
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Entry
104114880 CDS
T05025
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104114880
Enzymes [BR:
nto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
104114880
Transfer RNA biogenesis [BR:
nto03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
104114880
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
104114880
NCBI-ProteinID:
XP_009623718
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Position
7:110730281..110745758
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AA seq
792 aa
AA seq
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MAVRAMNSCVIFRSAATPPLAASRRCCVRQFTTSRNRKHLNLHSFLRCTPYPLSHVTVRS
YSVHNLVEMVMEELASIRKRGRVRATSKLELASTGELLEDKLRKGTLQKGLLLEFKKDSE
RVLLAVALKPDGKKNWMVSDQNGITTSIKPQQVTFIVPGVENFEPTEISDFVQKAQDNLD
TALLEFAWNELVEKNKSVTVQELAEMIFGSAEPLESYCAHLLLSRDEVHFTVLESKGLSP
VYGPRTAAQVGELSRRKLANEAAEKEFEELIQLLRSAKQMPPQDKPPRSSWKTEEKIWHK
IESLEAFAIDACKNDDQKRTAGMILKAMGLAKTSSAAVNLLIDIGYFPVHVNLDLLKLNI
PTDHRDEIMSVAESILSSSTDLDEADRVDLTHLKVYAIDVDEADELDDALSAARLQDGRI
KVWIHVADPTSLLQPGSIIDKDARRRGTSIFLPTATYPMFPERLAMEGMSLKQGKLCNAV
TVSVVLRSDGSIAEYSVENSIIKPTYMLTYESATELLHLNLEEEIELKILSEAAALRLRW
RREQGAIDTGTLETRIKVTSPDHPEPSIKLYVENQADAAMRLVSEMMILCGEVIATYGSH
NNIPLPYRGQPQSNIDTSAFEHLPEGPVRSSAIVRIMRAAEMDFRNPVRHGVLGLPGYVQ
FTSPIRRYMDLAAHYQVKAFLRGDSLPFSAGELEGIASTVNMTTRVVRRLSSSSLRYWIL
EYLRRQPKGKRFRSLVLRFIKDRIAAILLTEIGVQASSWVSLGVQIGDEVDVQVEEAHPR
DDVLSLKEVEAV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcgccatgaacagctgcgtaattttccgttccgccgcaacgccaccgctc
gccgcctcacgcagatgctgtgtccgtcaattcaccacctcccgaaatagaaagcatttg
aatttacattcatttctccgttgtacgccttatcctcttagccacgtcactgttcggagc
tattcagttcacaacctcgttgaaatggtcatggaagagctcgcatccattcgcaaacgt
ggcagagttcgtgctactagcaagctggaattagcaagcacaggagagcttcttgaggac
aagttgagaaaaggaacactacagaaaggactactgctggagttcaagaaggattctgaa
agggtgctgctagcagttgctcttaaacctgatggcaaaaagaattggatggtctctgat
cagaatgggattacgacctccattaagccacaacaagtaacttttattgttcctggtgtt
gaaaactttgagcccacagaaatatcagattttgttcagaaagctcaggataacttggac
acagcactacttgaatttgcatggaatgagcttgttgaaaaaaacaaatccgtaacagtt
caggaactggctgagatgatttttggtagtgcggagcctcttgagagctattgtgcgcac
ctactgttatcgagagatgaggtgcatttcacagttctggagtcaaaaggtctttctcct
gtatatggacctcggactgctgcccaggtgggcgaactttcacgaaggaagcttgctaac
gaggctgcagagaaggagtttgaggaacttatacagttactgcgatctgctaaacaaatg
cctcctcaggacaaaccgccaagatcttcctggaagactgaagagaaaatctggcacaag
attgagtctcttgaagcttttgccattgatgcttgcaaaaacgatgatcaaaagagaaca
gctgggatgattttgaaggccatgggactggcaaagacctcatctgcagcagtgaatctc
ctcatagatatagggtattttcctgtacatgtaaatcttgatttgttaaagttaaacatc
cctactgatcatcgagacgagattatgtcggtcgcagagagtattttgtcttcatcaaca
gaccttgatgaggctgatagagtagacctgactcacctgaaggtttacgcgattgatgtt
gatgaggctgatgagcttgatgacgcattgagtgcagcaaggctgcaggatggccggatt
aaagtttggatacatgttgcagatccaactagtttacttcagccaggaagtataatagac
aaagatgccagaagaagaggaacttctatattcttgcctactgcaacatatccgatgttt
cctgaaaggttggccatggaaggcatgagtctgaagcaaggaaagctgtgtaatgctgtc
actgtgtctgttgtgctgcgttctgatggcagcattgcagaatattcggtggaaaactca
atcatcaagccaacatatatgttaacctatgagagtgcaacagagctccttcatttgaat
cttgaagaagagattgaactgaaaattctttctgaagcagctgcactccggttaagatgg
cgtcgagaacagggtgctatagacacaggcaccttagaaacacgtattaaggtgaccagt
ccagatcatccagagccatcaatcaagttgtatgttgaaaatcaggctgatgcagctatg
aggcttgtttctgagatgatgatactctgtggggaagttatagccacttatggttctcat
aacaacattcctttaccatacagaggacagcctcaatctaatatcgacacatctgcattt
gaacaccttcctgagggacctgtcaggagttctgctattgttcgaattatgcgtgcagct
gaaatggatttcaggaatcctgtacgccatggggtgttgggacttccaggctatgttcag
tttacctcccctatccgaagatatatggatctcgcagcccattaccaggtaaaagccttt
cttagaggtgattctcttcccttctcagctggggagctggaaggcattgcctctacggta
aacatgacaaccagagttgtaagaaggctttccagcagcagtcttcgttattggatactg
gagtacttgagaaggcaaccgaaagggaaacggtttcgctctctagtccttagattcatc
aaagaccgaatagctgcaatactgttgacggagattggagttcaagcttcttcttgggtg
tctcttggtgtacaaattggtgatgaagtagatgtgcaagttgaagaagctcatccgcgt
gatgatgttctctctcttaaggaggttgaggcggtatag
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