Nicotiana tomentosiformis: 104114963
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Entry
104114963 CDS
T05025
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03030
DNA replication
nto03410
Base excision repair
nto03420
Nucleotide excision repair
nto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104114963
03410 Base excision repair
104114963
03420 Nucleotide excision repair
104114963
03430 Mismatch repair
104114963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104114963
03036 Chromosome and associated proteins [BR:
nto03036
]
104114963
03400 DNA repair and recombination proteins [BR:
nto03400
]
104114963
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104114963
DNA Replication Termination Factors
ELG1-RFC complex
104114963
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104114963
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104114963
Check point factors
HRAD17(Rad24)-RFC complex
104114963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
RsgA_GTPase
COMPASS-Shg1
EnY2
nSTAND3
RuvB_N
Mst1_SARAH
AAA_25
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
104114963
NCBI-ProteinID:
XP_070048792
LinkDB
All DBs
Position
1:5306883..5311322
Genome browser
AA seq
457 aa
AA seq
DB search
MQANIVVLPPAPAPPITSPPKLSIPSPPPTPLILQTSLQDEEIEAVPLPASPTQTTEDEK
DTTKEKDITSPEQKDKRFKWADKYRPNALKDFLCNRNTALELKALAETDGSNRHYIFAGQ
PGVGKRTMIFALLREVFGHDKIQAREKCKVFYLKGEAVPSIQVNVKESKKHVEINLSETK
GYEKHVIVELINERKHKASIRSAPCHRDDCKAIILGEADKLSTDALLYTKWMLERYTGCY
KVFFCCSDITKLQPIKSICKVVHLQKPSDDEIVDVLEFIAKQEEIELPHKLAAQIASNSK
SNLRQAIRSFEATWHFNTCLTENQEIKTGWEDDIAKIAKNIIEEQSPKQLYDIRGKLQNL
IEHNVSAEFIFNTLVEELKSNLDDQFHKEIDNLKMKYNINSKDLEQGKSDNDAVKKIVLQ
FMKVEEFIAKFMSWYKTSVLKKGNHNPSQAYPSKGNN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaatatagtagtactaccaccagcccctgcaccaccaataacatcaccacca
aaattgtcaataccatctccaccgccaactccattaatattgcaaacatcattgcaagat
gaagaaattgaagcagtaccattaccagcttcaccaactcaaactacagaggatgaaaaa
gatactacaaaagagaaggatattacaagtccagaacagaaagacaaaagatttaaatgg
gctgacaagtataggcctaatgctcttaaagattttctatgcaatagaaatactgcactt
gaactgaaggcactggcagaaacagatggcagtaatcgtcattatatatttgcaggacag
ccaggagtagggaaaagaaccatgatatttgctttgcttcgcgaagtttttggacatgat
aaaatacaggcaagagaaaagtgcaaggtgttctacttaaagggagaagcagtgccgagc
atccaagtaaatgtgaaggaatcaaagaaacatgttgagatcaatctctctgaaactaaa
ggctacgagaaacatgtcatcgtagaactaatcaatgagagaaagcacaaagcatccatc
agatcagcaccttgccatcgtgatgactgtaaagctatcattcttggtgaagctgacaag
ctatcaacagatgctttgctatataccaaatggatgttagaaagatatacaggttgttat
aaggtcttcttttgctgcagtgatatcaccaagctccagccaattaagtctatttgtaag
gttgttcatctccaaaaaccttcagatgacgagattgtagacgtcttggaattcatagca
aaacaggaagaaatagaactaccacataaactggcagcacagattgctagtaactccaaa
agtaacctacgtcaagcaattcgctcttttgaagctacctggcacttcaacacttgcttg
actgagaatcaagaaatcaagacagggtgggaagatgacattgcaaagattgctaaaaac
ataattgaggagcaaagcccgaagcagctatatgatatccgtgggaaactgcagaatttg
atagagcacaacgtgtctgctgagttcatctttaatactttggtagaagaactaaagagt
aatttggatgaccaattccacaaggaaattgacaatctgaaaatgaagtacaatataaat
tcaaaggatctggaacaaggaaaaagtgataatgatgcagtgaaaaagattgttctccaa
tttatgaaggttgaagagttcatagctaaattcatgagctggtataagacttcagttctg
aagaaaggaaatcacaacccctcacaagcctatccctccaaggggaataattag
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