KEGG   Nicotiana tomentosiformis: 104115126
Entry
104115126         CDS       T05025                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104115126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nto03400]
    104115126
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104115126
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA
Other DBs
NCBI-GeneID: 104115126
NCBI-ProteinID: XP_070041889
LinkDB
Position
9:98386061..98399988
AA seq 658 aa
MSTSSQVQVGFLVPVSGNLEEDEKSSIPKIPLSEGLNLVGRDCIPVTDKRLSRKHLTVTA
TSTGSADVLVEGTNPVVIRLKGERKKLLSGERWKIESGDVIELIPGRYLFKYVSTAPKDE
TSTINKQKRPFSEESITDKGQMHGKKKAREIFQEEASEKNMLHNNGQETENSVEAIRQFR
VPKHKLPLTFRLMRVRELPAWANTEAVSINDVIQGNVLVAILSNYMVDMDWLLSACPALK
RIPNVLVIHGEGDGVMEHMKRSKPVNWILHKPSLPIAYGTHHSKAMILVYPTGVRVIVHT
ANLIYVDWNNKSQGLWMQDFPWKDQNNLGKDVGFENDLVDYLSVLKWPEFTANIPAFGSC
KINSLFFKRFDYSSAAVRLIASVPGYHSGPSLKKWGHMKLRTILQECTFSKEFQKSPLIY
QFSSLGSLDEKWMAELASSMSAGVSEDKKPLGIGEPLIVWPSVEDVRCSLEGYAAGNAVP
SPLKNVEKEFLKKYWARWKASHTGRCRAMPHIKTFLRYNGQSLAWLLLTSSNLSKAAWGS
LQKNNSQLMIRSYELGVLFLPSSVKRGCGFSCTDNGYSSEDETSMHEGNRIKLVTLAWQG
KGNDDYSEVLKLPVPYELPPKPYSAEDIPWSWDRRYTKKDVYGQVWPRQVKLYTNQDS
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgtccacctcttctcaggttcaggttggatttttggtgcctgtaagtggtaatttggaa
gaggatgagaaaagttccatacctaagattccactttcagaagggcttaatttggtgggc
cgcgattgcattccagttactgataaacgactgagtcgcaagcatcttactgtcactgcc
acctccactggctccgctgatgtcctcgtggaaggaacaaaccctgttgtcataagatta
aagggtgagagaaagaagcttttgtctggagagaggtggaaaattgaaagtggtgatgtc
atagagttgatacctggccgttacctatttaagtatgttagcacagctcctaaggatgaa
acttcaacaatcaacaaacaaaaaagacctttcagtgaagaaagtattactgacaaaggt
cagatgcatggtaagaagaaagctcgagaaatttttcaagaggaagcttcagaaaagaat
atgctgcacaacaatggccaagaaacagaaaactctgtggaggcgatacgccagtttagg
gttccgaagcataagttaccgctcacattcagattaatgagagtgcgtgagcttccagca
tgggcaaataccgaggctgtttctattaatgatgttattcaggggaatgtgcttgtagct
atcctttcgaattacatggtggatatggattggctactttctgcatgtccagctcttaaa
cggattcccaacgttctcgtcattcatggagaaggtgatggtgtcatggagcatatgaag
agaagcaaaccggtaaattggattctgcacaaaccttctttaccaattgcgtatggaaca
caccattcaaaagccatgattcttgtctatccaacaggagtgagagttattgtacatact
gcaaacttgatctatgttgattggaataacaaaagccagggattgtggatgcaagatttc
ccatggaaggatcaaaacaatttgggcaaggatgtcggatttgaaaatgatttggttgat
tatctaagtgtgttaaagtggccggaatttactgctaatataccagcctttggaagctgc
aagatcaattccttgttcttcaaaagatttgattacagtagtgcagcggttaggctaatt
gcatctgtgcctggatatcattcaggtccgagtttgaagaagtggggtcatatgaagtta
cgtactattcttcaggaatgtacttttagcaaagaatttcagaaatctcctcttatttac
cagttctcctccctaggttctttggatgagaaatggatggcagagctcgcctcttcaatg
tcggctggagtttcagaagataaaaaacctctgggcattggggagccattgatagtatgg
cccagtgtcgaagatgttagatgttctttggagggatacgcagctggaaatgccgttcca
agcccattaaaaaatgtggagaaagaatttctgaagaagtactgggctagatggaaggct
agccacactggtcgttgtcgtgcaatgcctcatatcaagacgtttctgcgttacaacggt
caatcattagcgtggttattgcttacttcgtcaaatctcagcaaagctgcctggggaagt
cttcagaaaaataattctcagttgatgattcgttcctacgagctaggggtgctctttttg
ccatcttctgttaaacgtggctgtggattttcttgtacagataatggttattcatcagag
gacgaaactagtatgcacgaagggaacagaataaagctggtaactctagcttggcaagga
aagggaaatgatgattattctgaagtactaaagttgcccgtgccttatgagcttcctcca
aaaccatattccgctgaagatattccttggtcatgggatcggcgatataccaagaaagac
gtttatggccaagtttggccgagacaagtaaagctatataccaaccaagactcatga

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