Nicotiana tomentosiformis: 104115362
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Entry
104115362 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03030
DNA replication
nto03410
Base excision repair
nto03420
Nucleotide excision repair
nto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104115362
03410 Base excision repair
104115362
03420 Nucleotide excision repair
104115362
03430 Mismatch repair
104115362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104115362
03036 Chromosome and associated proteins [BR:
nto03036
]
104115362
03400 DNA repair and recombination proteins [BR:
nto03400
]
104115362
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104115362
DNA Replication Termination Factors
ELG1-RFC complex
104115362
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104115362
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104115362
Check point factors
HRAD17(Rad24)-RFC complex
104115362
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
RuvB_N
AAA_lid_RFC1
TIP49
Motif
Other DBs
NCBI-GeneID:
104115362
NCBI-ProteinID:
XP_018632904
LinkDB
All DBs
Position
9:complement(91100052..91111532)
Genome browser
AA seq
816 aa
AA seq
DB search
MESYSASNRALQVKNSSSVKQRRSGYEPSDTETDWQESPSLELNTKNVDIIIDTESQQQN
VLAFDQAKNKYSSINPRRPSKSPYKSRRDEGDVHFRRLALRAQHVITPFSHSNARRNVSP
FSKSEYRRPPSHSNVRRDVSPFSKSEYRRRHNSVHISRRENSKEEHHLDKQSFSSSTRKQ
NNIVLLKNEVAIRAKANYSRRAISAPRPALFDTSKDRRRTEITRSPTSRTLSSVGEMNVI
LANAKISRGSIIPAGVNNMFQSTESISPSDVFFTKEYSAFTMEKITIPENSVTHSKFNSM
PRVSTDKNVSSVNKTPANFSQNGRGISTSTIVTSNSISMPQVSTDRNVSCVNKMSANFNQ
SDRGIISSSTIVTRTATTNPSSAISRQSSKLSNATTRTSRSAKNFTANRKKSSSQTEAWF
SCIKNGSCRKSRKDQSPERGRLINEASVIDKAFVVESLRQFWADKHQPTSLDGFICNKQQ
ALLLSHLVSSNEPLPHILFKGPPGSGKRALSIALLREIYGDAICNISHDLKYFHIQETKP
VQVVVPVSSSPHHIELNVHLEPNARFALLALVKQISSEFALTPEVSRINMKADSKVLVLY
DVDKSEENMQHLIKWIIDCNSDACKLILFSESDASILELVRSRCTVIEVEAPATHEIVEV
LIEISRKEDLELSRGFAAKIATKSKQNMRRAIMALEACKAHNYPFAEDQPISVGWEESVL
ELAAEILTDPTPTRLFSIRGKFQKLLVEFVHPKLILLKLVEQFLKRVDGGLKREIYYWHA
YYDKRLPIGTSALLKLEEFVAKIMSIYRKRSGNIQQ
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggagagttattctgcttctaacagagcgttacaagttaaaaattcgtcctctgtaaag
caaaggcgaagcggatatgagccatctgatacagagaccgattggcaggaaagtccaagc
ctggaactaaatacaaagaatgttgatataattattgacactgaatcccaacagcaaaat
gtattagcttttgatcaagcgaagaacaaatattcgagtataaacccgagaaggccaagc
aaatccccgtataaatcgcgcagagatgaaggtgatgttcattttcgtcgacttgctcta
cgtgcacaacatgttattactccattttcacattcaaatgctcgtagaaatgtaagtccc
ttttcaaaatccgaatatcgtagaccaccttcacattcaaatgttcgtagagatgttagt
cctttttcaaaatctgaatatcgacgtagacataattcagtacatatatccaggagagag
aattcaaaagaggaacatcaccttgacaagcaaagcttttcgagttcaactagaaagcaa
aataacatagtactactaaaaaatgaggttgcaatccgtgccaaagcaaattatagtcgc
agggctatatccgctcctagacctgctctttttgacacgtccaaggatcgaagaagaaca
gaaataacacgatccccaacgtcgaggaccttgtcttctgtaggtgaaatgaatgtaata
ttagccaatgcaaagatctcaagaggctccattattccagctggtgtgaataatatgttt
caaagcactgaatctatttcaccaagtgatgttttctttactaaggaatattcagctttt
accatggaaaaaattaccatccctgaaaatagtgtcacacatagcaaattcaattcaatg
cctcgggtatcgactgataaaaatgtcagttctgttaataagacgcccgcgaatttcagt
caaaatggaaggggaatttcaactagcactattgtaacaagcaattccatttcaatgcct
caggtatcgactgatagaaatgtcagttgtgtgaataaaatgtccgcaaatttcaatcag
agtgacaggggaattatttcatctagtactattgtgacacgaacagcaactacgaatccg
agttctgctataagtaggcagagcagtaaactaagtaatgctactacaaggacgagtaga
agtgcaaaaaacttcacagcaaataggaaaaagagtagtagtcaaacagaagcatggttt
tcttgtataaagaatggatcttgtagaaaatcaagaaaagatcaatctccagaaagaggg
aggcttattaatgaagcttcagtaattgacaaggcatttgttgttgaaagtttgagacaa
ttttgggctgataaacatcaaccaacttcattggatggattcatttgcaacaagcaacaa
gctttactacttagtcatcttgtttcttcaaatgaaccactcccacacatcttgttcaag
ggtcctccgggatctggtaaaagagcattatcgatagctcttttgcgtgaaatctatggc
gatgcaatttgcaatatatcgcatgatctgaaatacttccacatccaggaaacgaagcca
gttcaagtcgttgtaccagtaagctcaagtcctcaccatattgagctcaatgttcattta
gagcccaatgctagatttgcattattggctttggttaagcaaataagcagtgaatttgca
ctaaccccggaagtaagcaggattaatatgaaggcagattccaaagtattagttctttac
gacgtggataaatctgaggagaacatgcaacacttaataaaatggatcatcgactgtaat
tcagatgcttgtaagctcattctcttcagtgaaagtgatgcatctatactcgagttagtg
agaagtcgctgcacggttattgaagttgaagctccagcaactcatgaaattgtggaagtt
ctcattgagatatcaagaaaagaagaccttgaactatctaggggctttgctgctaaaata
gctacaaaatcaaagcaaaacatgcgaagagcaataatggctcttgaagcctgcaaagca
cacaactatccttttgctgaggatcaaccaatttcagtaggatgggaagaatctgtacta
gaacttgcagcggaaattctaactgatccaactccaacaaggttattttctattcggggc
aagttccaaaaactcctagtcgagtttgtgcacccaaaacttatactcctgaaacttgtt
gaacaattccttaagagggttgatggaggtttaaaaagggaaatatattattggcatgct
tattatgacaaaagactcccaattggaacaagcgctctcttaaaattagaagaatttgta
gccaaaattatgagcatatacaggaaacgatcgggcaacattcagcagtaa
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