Nicotiana tomentosiformis: 104115802
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Entry
104115802 CDS
T05025
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104115802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104115802
03036 Chromosome and associated proteins [BR:
nto03036
]
104115802
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104115802
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104115802
PBAF complex
104115802
GBAF(ncBAF) complex
104115802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Methyltransf_30
Motif
Other DBs
NCBI-GeneID:
104115802
NCBI-ProteinID:
XP_009624805
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All DBs
Position
4:complement(136900015..136903660)
Genome browser
AA seq
534 aa
AA seq
DB search
MAETGDSKSPAANPNSETTSPPPPPPPPHPLQQPQHQPQTPSQPQLQPPPQTPSQPQPAP
QQPQTELLPPKCPQQLESSPNPTTPSATDSKDVTPTTLSSRLTEPDYIYIPSYSRWFSWN
SIHESEVRFLPEFFDGRSPSKNPRTYKYYRNSIIRRFRENPTKKITFTEARKTIIGDVGS
IRRVFDFLETWGLINYTANSSKLLLKWEEKESKSTSSASAAPQNADANGTTPTDFTAPRK
RLCSACKSACSIACFVSDKYDLTLCARCYVRGNFRVGMNTSDFRRVEISEEVKTDWTDKE
TLHLLEVLMHYGDDWKKVAEHVGGRSAKECVARFVKLPFGEQFMGPPVSAEVDNEPGSET
ILLPSKRMRLTPLADASNPIMAQAAFLSALAGKEVAELAAHAAVTALSDNGEGITKGSLG
SLPGVLEKKESDGTSNGIAKDTLERALVEARSQLEGEAQDLERAVSDVAIEAKEIEDKIA
RFEERDLQMEKEWQQLMQLKNLIFFDQLTLLLNKVGSAKAGETIGEEVMNVKAE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaccggcgacagcaagtcaccggcagctaatcccaactctgaaactacctct
ccgccaccgccaccgccaccaccacatccacttcaacagccacagcatcagccacagaca
ccgtcacagccacaactacaaccaccgccacaaacaccgtcacagccacagccagcacca
cagcaacctcaaactgaacttttgcccccaaagtgtccccaacaactggaatcctcccca
aacccaaccaccccctccgccaccgattccaaagacgtgacccccactaccctctcttcc
cgcctcactgagcctgattatatttatatccccagctactcccgttggttttcatggaat
agcatacatgaaagtgaggttcgatttcttcctgaatttttcgacggaagatcaccttct
aagaaccctaggacttacaaatactataggaattccattattcgtagattcagagaaaat
cccactaaaaaaataacctttactgaggctcgcaagaccattattggtgatgtgggttca
attcgtagggttttcgatttcctggagacatggggcttgattaactacactgctaactct
tccaaattgctgctcaagtgggaagaaaaagagtctaagtctacttcttctgcttccgca
gctccgcaaaatgctgatgctaatggaactactcccactgattttactgcccccaggaag
agactttgcagtgcctgcaaatcagcttgcagcattgcctgttttgtttctgataagtat
gatttgactctttgtgcaagatgctatgtccgtggtaatttcagagtcggcatgaatact
tcagattttcggcgcgttgaaattagtgaagaagttaagacagattggaccgacaaagaa
actttgcaccttttagaagttcttatgcattatggcgatgattggaagaaggttgctgag
catgttggtggcagaagcgcaaaagaatgtgtggctcgatttgtgaagcttccttttggt
gagcagtttatgggccctcccgtatctgcagaagtggataatgaacctgggtctgaaact
atacttcttccatccaagagaatgcgcctcacaccacttgctgatgctagcaacccaatt
atggctcaggctgctttcctttctgctctagcgggaaaagaggttgcagaattagcagca
catgccgctgttacggctttgtctgataatggtgagggaataacgaaagggagtctagga
tctctacctggtgttttggagaagaaagaatcggacggcacttccaatgggattgccaag
gatacacttgaaagagctcttgttgaagcacggtctcagcttgagggggaggcacaggac
ctagagagagccgtctccgatgtggctatcgaggccaaggagattgaggacaaaattgct
cgttttgaggaacgtgatttgcagatggaaaaggagtggcaacagctgatgcagcttaag
aacctgatcttctttgatcagcttactttgctgctaaataaagttggttctgcaaaagct
ggagaaaccattggggaggaggtgatgaatgttaaggcagaatga
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