Nicotiana tomentosiformis: 104115917
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Entry
104115917 CDS
T05025
Name
(RefSeq) eukaryotic initiation factor 4A-8 isoform X1
KO
K03257
translation initiation factor 4A
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104115917
03012 Translation factors [BR:
nto03012
]
104115917
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104115917
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104115917
mRNA cycle factors
Stress granule specific factors
104115917
Translation factors [BR:
nto03012
]
Eukaryotic type
Initiation factors
eIF-4
104115917
Exosome [BR:
nto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104115917
Exosomal proteins of bladder cancer cells
104115917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
DUF8050
Motif
Other DBs
NCBI-GeneID:
104115917
NCBI-ProteinID:
XP_009624936
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All DBs
Position
6:128070945..128074656
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AA seq
413 aa
AA seq
DB search
MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMSLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVVVGTPGRVFDMLRRQSLRP
DYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNVIIEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttggcaccagatggagctcaatttgatgcccgtcaatatgattctaagatg
aatgatttacttgccgctgatggaaaagatttctttacatcatatgacgaagtttatgac
agttttgatgctatgagtttgcaagagaaccttctcaggggcatttatgcttatggtttt
gagaaaccttctgcaattcaacaaagaggtatagttccattttgcaagggacttgacgta
attcagcaggctcaatctggcacaggaaagacagctactttttgttctggaatcttgcag
cagcttgattatggtttagttcaatgccaagccttagtgttggcacctactcgtgaactt
gctcaacagattgagaaggtgatgcgagcacttggtgactaccttggggttaaggtccat
gcttgtgtaggtgggactagtgtcagggaggatcaacgtattctcgcggctggtgttcat
gttgttgttggcaccccgggacgtgtgtttgacatgttgcgaagacagtctctccgtcct
gattacctcagaatgtttgtgctagacgaggctgatgaaatgctgtcacgtggttttaag
gatcagatatatgatatttttcagatgctacctaccaaagttcaagtcggagtgttttct
gcgaccatgccaccagaagcccttgacatcacaagaaagttcatgaataagcccgtgaga
atcttggttaaacgcgatgaattgacacttgagggtatcaaacagttctatgtcaatgtt
gataaggaagaatggaagctcgagacactctgcgatctatacgagacgctagcaatcaca
cagagtgtcatctttgtgaacaccaggcgcaaggttgattggttaacagacaaaatgcga
agccgtgatcacacagtctcagctacacatggagatatggaccagaacactagggacata
atcatgcgcgagtttcgctctggttcttcccgtgtccttatcacaaccgatctgctggct
cgtggtatagatgtacaacaagtatcacttgtgatcaattatgatctcccaactcagccg
gagaattatctccatcgcattggaagaagtggaagatttggaaggaaaggagttgcaatc
aactttgtgacaacagatgatgaaagaatgttgttcgatattcagaagttctacaacgtt
ataatcgaagaactcccctcaaatgttgctgatctcctctga
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