Nicotiana tomentosiformis: 104116004
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Entry
104116004 CDS
T05025
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104116004
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104116004
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
104116004
NCBI-ProteinID:
XP_009625069
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Position
2:146384051..146386168
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AA seq
376 aa
AA seq
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MANPSSLLLFSCLVLFSISCSNAKTLNPIDSCWRSDPNWSSNRQALADCAKGFGSGALGG
KGGAIYVVNDTDDDPVNPKPGTLRYGVIQTEPLWIIFEKDMLINLRNELIINSFKTIDGR
GAKVEIGLGPCISIDVIKNVIIHGVKIDICLRAPEGNVRISPTEVVFRPGTDGNAIIIRN
SSNVWIDHCFLGRATEGLLDIIFTSYDITVSNNIFFKHNWVMTLGNIDGFYQDKIMNVTI
AFNHFGPYLNDRIPRIRYGYVHIANNYYEPWGLHAISGSSEPTIFSEGNYFIASNNVTLK
EVTHREYALPTVWAQWNWKSSKDKFLNGAFFNASGTGNPTPNYTSPQSFPVADGSQVPSL
TSDAGPLQCIPNRPCL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcccagttctctcttattattttcatgtcttgtattgttttccatttcttgt
tcgaatgcaaaaactctaaaccctatagattcatgttggagatcagatccgaattggtct
agcaatcgccaagctttagccgattgtgctaaaggctttggaagtggtgccttgggagga
aaaggcggagcgatttacgtcgtaaatgatactgacgatgaccccgtaaatcctaaacca
ggcaccctccgatatggtgtaattcaaaccgaaccactttggattattttcgaaaaagat
atgctcataaatttaagaaacgaacttataattaatagttttaaaaccatagatggaaga
ggtgcgaaagttgaaataggattaggaccttgtattagtattgatgttataaagaatgtg
attattcatggagtaaagatagatatttgcttgagagctccagaaggaaatgttagaatt
agtcctactgaggttgtgtttaggcctggtactgatggaaatgccatcattataagaaat
tcttcaaatgtttggattgaccattgttttctcggtcgtgctactgaaggtctcctcgat
attatttttacttcttatgatatcacagtctcaaacaatatctttttcaaacataattgg
gtgatgacgctggggaacatagacggattttatcaggacaagatcatgaatgtcacaatc
gcattcaatcattttggtccttatcttaatgatagaataccaaggattcgatatggatat
gttcatattgccaacaattattatgaaccctggggacttcatgccattagtggaagctcc
gaaccaactatttttagtgaagggaattacttcattgcttccaacaacgtgacgttgaaa
gaggtaacacatagggaatatgctttgccaacggtgtgggcgcagtggaattggaagtca
tccaaagacaaattcttgaatggagctttcttcaatgcatcaggaacaggaaatccaact
ccaaattatacttcaccacagtcatttccagttgctgatggatcccaagttccttcttta
acttctgatgctggtcctcttcagtgtattcctaaccgaccctgcctttaa
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