KEGG   Nicotiana tomentosiformis: 104116031
Entry
104116031         CDS       T05025                                 
Name
(RefSeq) protein VACUOLELESS1
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104116031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nto04131]
    104116031
Membrane trafficking [BR:nto04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    104116031
   Hops complex
    104116031
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st
Other DBs
NCBI-GeneID: 104116031
NCBI-ProteinID: XP_009625096
LinkDB
Position
7:33048329..33059548
AA seq 843 aa
MAAVTVAAEWQLLHNRYYRKPELYQMQWKHVDLTRNKVACAPFGGPIAVIRDDAKIVQLY
AESALRKLRIFNSAGVQISETVWKNPGGRLIGMSWTDDQTLVCITQDGTIYRYNIHAEPI
EPNSQLTLGADCFTHSVVECIFWGNGVVCINEAFQVYCIPDFNNPKPIKLADTGLEDFPL
CTAVIEPQYTMSGNVEVLMGVADHVLLVEEDGVQQVGLGIGPLQKMVVSQNGKLLAAFTH
DDRLLVISTDFSSTIFDYTFEKSALPPEQLAWCGLDSVLLYWDDKLLMVGPGDPVSYFYD
EPVLLIPECDGVRILSNMSMEFLHRVPDSTVSIFQIGSTLPAALLYDALDHFDRRSAKAD
ENLRLIRSSLPEAVEACIDAAGHEFDVSQQRMLLRAANYGQAFCSHFQRDHIQEMCKTLR
VLNAVRYPDIGIPLSIQQYKLLTPAVLIARLINAHRHLLALQISEYLGMNQEVVVMHWTS
TKITASAAIPDATLLEMLLDKLKICKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQV
PLLLSIGQEDTALMKATESGDTDLVYLVLFHIWQKRPALEFFGTIQARPLARDLFVNYAR
HYKHEFLKDFFLSTGQLQDVAFLLWKDSWELSKNPMASKGSPLHGPRIKLIEKSQHLFAE
TKEYVFESKAAEEHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAAKVKTE
FKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACVDADEKGEALKYIPK
LTDPRERAEAYARIGMAKEAADAASQAKDNELLGRLKQTFAQNAAASSIFDTLRDRLSFP
SVS
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggcggcagtcacagtggccgcagaatggcagctcctccacaatcgctactaccggaaa
ccagaactttaccagatgcaatggaagcacgtggacctcacgcgcaacaaagtcgcctgc
gctcctttcggcggtccaatcgctgtcatccgtgacgacgctaagatcgtccaactctac
gccgaatccgcccttcggaagctccgtatcttcaattctgccggcgttcagatctccgaa
actgtctggaagaatcccggcggccgactcatcggcatgtcatggactgacgatcaaacc
ctagtttgcatcactcaggacggcaccatttaccgttacaatatccacgccgagcctatt
gaaccgaattctcagctcacattaggcgctgactgttttactcatagcgtagttgaatgc
atcttctggggaaacggtgtcgtttgtattaacgaggcgtttcaggtttactgcataccc
gatttcaacaacccgaaaccaatcaaattggcggatactggtttggaggattttccgtta
tgtacggctgtgatcgagccgcagtatactatgtctgggaatgtggaggtactgatgggt
gttgctgatcacgtgttgctagtggaagaggatggtgttcagcaagttgggcttggaatt
gggcctctacagaaaatggtggtttctcagaatgggaagcttttggcagcttttacacat
gatgacaggcttcttgttatctctacggacttctccagcactattttcgactatactttt
gagaagtcagccctaccccctgagcagctagcatggtgtggattggacagtgtactactc
tactgggatgataagcttctaatggtgggtcctggagatcctgtcagctatttttatgat
gaaccagttctccttatccctgaatgtgacggggttagaatactctccaacatgagcatg
gaatttcttcatcgtgttccagattcaactgtctccatatttcagattggtagcacacta
ccagctgctttgctttatgatgccttagatcattttgacaggcggagtgccaaggctgat
gagaatctgaggctgatacggtcttcgttgcccgaggctgttgaagcatgtattgatgca
gcaggtcatgagtttgatgtttcacagcaacggatgcttttaagagcagcaaactacgga
caagccttttgcagccattttcaacgggaccacattcaagagatgtgcaaaaccttacga
gtcctaaatgctgtacgttacccagatattggaattcctctcagtattcagcagtataag
ttgcttacgcctgctgttctgattgctcgtcttattaatgctcatcgccaccttcttgcg
ctacaaatatcagaatatcttggcatgaatcaggaagttgtagtcatgcattggacaagt
acaaagatcacagcatcggcggcaatccctgatgccactcttctagaaatgttacttgat
aagctgaaaatatgcaaggggatctcttatgctgcagttgctgctcatgcggataagaat
ggtcgtcgaaagttagctgccatgcttgttgaacatgagccacgttcatctaagcaggtt
cctctattgctaagcattggacaagaagatactgctctgatgaaggctactgaaagtggt
gatactgatctggtttatcttgtccttttccatatctggcagaagagaccagctttggag
ttcttcgggacaatacaggccagacctctagctcgtgatttgtttgttaattatgcacgg
cattacaagcacgaatttctgaaggactttttcctatctactggacaacttcaggatgta
gctttcctattatggaaagattcatgggaattgtctaaaaatccaatggctagcaaagga
tctccacttcatggtccaagaataaaactcattgagaagtcccagcacctttttgcagaa
acaaaggagtatgtttttgaatcaaaagctgctgaagagcatgcaaaattgttaaggatg
caacatgagttggaggtgactacaaaacaggccatctttgtggattcaagtataagtgat
acaattcgtacatgcattgtgctggggaaccatcgtgctgccgcaaaagtcaaaacagaa
tttaaggtttcggaaaagcgatggtattggctcaaagtttttgctctggcaactattagg
gattgggatgccttggagaagttttcaaaggagaaaaggccaccaattggttaccgccca
tttgtcgaggcatgtgttgatgcagatgagaaaggtgaagcgctaaagtacataccaaag
ctgactgatcctcgcgaaagagcagaggcttatgcccgaattggaatggccaaggaagct
gccgatgctgcttctcaggctaaagataatgaattacttgggaggttgaagcagactttt
gctcaaaatgcagcagcttcatcaatttttgacacactgcgagaccggttatccttccca
agtgtttcttga

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