Nicotiana tomentosiformis: 104116184
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Entry
104116184 CDS
T05025
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104116184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104116184
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104116184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
104116184
NCBI-ProteinID:
XP_009625288
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All DBs
Position
5:complement(137332975..137336832)
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AA seq
464 aa
AA seq
DB search
MEMEPGKLFVGGISWDTNEDRLKEYFQVFGDVVEAVIMKDRITGRARGFGFVVFADPSVA
ERVVKEKHIIDGRTVEAKKAVPRDDQHITRNNGSMQGSPGPARTKKIFVGGLASSVTESD
FKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLYKTFHELNGKMVEVKRA
VPKELSPGPTRSQFGGQNYGLNRVNNLLNAYTQGYVPGSIGSYGVRMEGRYSPLTAGRNG
YSSFNPAEFNMPTGIDSALNPNYGGSGTFGSNYGRGFSSFYNGNSNRYGGPVGFAPGRVG
SGSMLNSVGWNLWDNESLNYGTNSANSTDFVGSGSGVAGYGTLGGLGTIWGASSISGQGG
GNGSFGSGNITNSGETGGAVYGRNSGGNAVNTSPYAPAKDVHTGAFGNLYGTVGASLYED
SAWRSASPELDGSASFGYGLGNADSLGLVGGYSVANRSNKGIAA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagccgggaaaattgtttgttgggggaatttcttgggacacgaatgaagat
cgtctcaaagaatatttccaagtttttggtgatgtggttgaagccgtgatcatgaaagat
cggatcactggccgtgctcgcggtttcggttttgttgtttttgcagacccttctgttgcc
gaaagagttgtcaaggaaaaacatataattgatggtagaactgtagaggcaaagaaggct
gttccgagagatgatcaacacattaccagaaacaatggaagcatgcagggctctccaggt
cctgctcgcactaaaaagatttttgttggaggcttggcatcctcagtcaccgagagtgac
ttcaagaattactttgatcaatttgggacgatcacagatgttgtggtgatgtatgatcac
aacacacaaaggcctagaggatttggattcatcacctacgactccgaggaggcggttgat
aaagttctatacaaaacattccatgaacttaacggtaaaatggtcgaggttaagcgtgca
gttcccaaagagctatcacctggtccaacccgaagccaatttggtggacagaactatggt
ttgaaccgggttaacaatttgcttaatgcgtatactcaaggttacgttccaggctcaatt
ggaagttatggagtgagaatggaaggtagatacagtccacttactgctggtcggaatgga
tattcttcttttaatcctgctgagtttaatatgccaactggcatagactccgcattgaac
ccaaactatggtggaagtggaacttttggttctaattatggacgtggattcagttctttt
tacaatgggaattcaaacaggtacggtggtcctgtcgggtttgcccccggaagggttgga
agtggttcaatgttgaattcagtaggatggaacctgtgggacaatgagagtcttaattat
ggaacaaattccgccaactctactgattttgttggttctggaagcggggttgcaggatat
ggtactcttggaggtctcggaacaatttggggtgcctcttcaatttcaggtcaaggtggt
ggaaatggttcttttggcagtggcaacatcactaacagtggtgaaacaggtggggcagtg
tatggacgaaactcaggcggcaatgctgtcaatacatcaccatatgctccagcaaaagac
gttcacactggggcttttgggaacttgtatggtactgtaggtgcttcactttatgaggac
tcggcctggcgatcagcatctccagaactagatggctctgcttcctttggttatggactt
gggaatgcagactcactcggtcttgttggtggttatagtgttgcaaatagatcaaataaa
ggaattgctgcctag
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