Nicotiana tomentosiformis: 104116740
Help
Entry
104116740 CDS
T05025
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nto01003
]
104116740
Enzymes [BR:
nto01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
104116740
Glycosyltransferases [BR:
nto01003
]
Polysaccharide
Structural polysaccharide
104116740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
104116740
NCBI-ProteinID:
XP_009625954
LinkDB
All DBs
Position
12:complement(124539851..124543994)
Genome browser
AA seq
521 aa
AA seq
DB search
MCRIEGDMEERERRRRRWGLGVMGLKGTTLGDSRVEKLKSSVIFSGSRMKLWMIRATTMV
LLWTCLVQMTTLGELWGPRVLKGWPCCFSQESAAALVVKSPLEVLARVLPPKRVYKNNGY
LMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDNFIMSL
RDEVRILRELPPRLKRRVQLGMIYTMPPISWSDISYYHNQVLPLIRKYKVVHLNRTDARL
ANNGQPLEIQKLRCRVNFSALKFTPQIEELGKKVIRLLRQKGPFMVLHLRYEMDMLAFSG
CTQGCNKEEVEELTRMRYAYPWWKEKIINSDLKRRDGLCPLTPEETAFTLRALDIDPSIQ
VYIAAGEIYGGTRRMASLTAAYPNLVRKETLLEPSELRFFQNHSSQMAALDYLVSLESDI
FVPTYDGNMAKVVEGHRRYLGFKKTILLDRKHLVDLIDQYNAGFLTWDEFSAAVKEAHAE
RMGNPTKRLVIPDRPKEEDYFYSNPWECLEPSNEDETSSSI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagaatagagggagatatggaagagagagaaaggaggagaaggaggtggggattg
ggtgtaatggggctaaaagggacaactttaggagatagtcgtgtagagaaactgaagagt
tctgtaattttttcggggtctagaatgaagttatggatgataagggcaacaacaatggta
ttgttgtggacttgtttggtccaaatgacaacattgggggaactttgggggcctagagtt
ttgaaaggttggccttgttgcttttctcaggagtctgctgcagcattggttgttaaatcg
ccactcgaggtccttgctagagttcttccccctaagagggtttacaagaataatggttat
ctcatggtttcatgtaatggaggtcttaatcaaatgcgagcagcaatatgtgatatggtt
gctattgcaagatatttgaatgtgactcttatagtgcctgagctggataaaacctccttt
tgggctgatccaagtgagtttcaagacatatttgatgttgataattttataatgtctttg
agggatgaagttcgaatattgagagagctacccccaagactgaagaggagagtacaacta
ggaatgatttataccatgcctcctattagttggtctgatatttcttattaccacaatcag
gtccttccattaattcggaaatacaaagttgttcacttgaatagaactgatgctcggctt
gctaataatggccaacctttggaaattcagaagctgcggtgccgagtcaattttagtgcc
ttaaaattcacccctcagatagaagagttgggtaaaaaggttattcgacttctcaggcaa
aaaggtccttttatggtgctgcacctcagatatgaaatggatatgttagctttctctggc
tgtactcagggctgcaacaaggaggaggttgaagagttgacaagaatgagatacgcttat
ccatggtggaaagaaaaaatcataaattctgatttgaaaaggagagatggtctctgtccc
ttgacacccgaggagactgccttcacattaagggcattggacattgatcctagcatccaa
gtttatattgctgctggggagatatatggtgggacaaggagaatggctagtcttacggca
gcttatccaaatctggtgaggaaggaaacactacttgagccttctgagcttaggttcttt
caaaatcactcttcacagatggcagcattagattatcttgtttcactggagagtgatatt
tttgtcccgacatatgatggaaacatggctaaagttgttgaaggacatcgcagatatctt
ggattcaagaaaacgatcttgctggacagaaagcatctagtcgatttgatagaccaatat
aatgctggattcttgacgtgggatgagttttctgctgctgttaaggaagctcacgctgaa
cgcatgggaaaccctactaagaggttggtgattccagaccggcctaaagaagaggattat
ttctactccaacccgtgggaatgcttagaaccatctaatgaggatgaaacatcaagtagc
atttaa
DBGET
integrated database retrieval system
