Nicotiana tomentosiformis: 104116844
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Entry
104116844 CDS
T05025
Name
(RefSeq) protein TIME FOR COFFEE isoform X1
Organism
nto
Nicotiana tomentosiformis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe-ADH
Motif
Other DBs
NCBI-GeneID:
104116844
NCBI-ProteinID:
XP_009626081
LinkDB
All DBs
Position
9:42125861..42132902
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AA seq
1649 aa
AA seq
DB search
MDRNREARRSGGMVAAAATSNGLSSRRRHRTNSLRDSPDEDGGVEIQESVRLRERVKKDR
DRERERERERERERERDNRDRDRDRDRISRSKRRRGERLIGGVDDSSEESVNDDEEDDDE
DTTTITTTNNVGVSGSSSTRLLPPNPPVPVTVGSISNHHHHHNNHNHTNHHLQPPRKSFP
PNTTKVFRTAAAAAAPVWKPGDEMIGVSVPRKARSASTKRSHDWISGVSGGGNSNSGVIT
GEQIHQQVSTASPVRQNIPATSTQSPAAPLSPSSSNVSVRKKIKPNGQKRPPAKSPPKAS
SSNNPEELEIEIAEVLYGLMTQSQGPSKKESGGGPNDTTREVNNRSRVSSPVSNSNSSAT
PLSAVAPKRKRPRQVLENPGGFGVRSSPISSSTATNKVEMDQTTTMKMEVSSPNLEKTPQ
SAAENGVSLYDLSASVQSLPVASDPVPETMKVESEAKRRPEESEFMESKEEVRESSTLGA
ENSNREDAVAVTQVIVSEVESQREEKFQIDLMAPPPQLRSSPEREAEIDFGSAAVDKKPI
LAENIVQMKHSVREKDNERIGKAEKEEGISVEAEEKKTKAAALEELNPHKTSEGSRGRNI
DLQLDLEKPEKDSGVSSKFQQQSQKLQQQQQQQHQPPPPQKATKEEPIIEKTGQSSSLPM
PMSMASWPGGLPPMGYMAPLQGVVAMDGTTVSSAPIQPLFSQPRPKRCATHCYIARNIHC
LQQFMKMHPFWPPATGSAPFFGAKTNLNVLPPTDLAGRASAGPDKGQGLAIFPNNVGKDK
VQPANISDATAQRKQQILLQQALPPVAPNNLLHGPAFIFPINQQQAAAAAAAAVRPGPTK
SPSTTGTAALSNTSNLTAGTAASAAAGGAASAISFNYPNMSPNEAQYLAILQNNAYAFPI
PAVGAPPNYRGAHPQPMPLFNGSFYSSQMIHPSQVQQQQQQQPPTSQSQQMQQGQQNTSM
SSGSSSSQKHLQSQQQRSQGNAVNGGNLHNFPGSKNHPSQSPAQSHNQHIPQQTRHIENE
VGSEDSPSTTERKRSHGPMNVYNQNFAMPMHPSNFGLMTPPATFGIASSAGGGSNHQTEK
KPQQQQGLKTSLESVPPQPFAMSFASLNGSTAGPGIDMSMAQNHAIFQSLPEATRQNLQM
AAAAAQAVQQKKNFRISEDGKSGSSDQTGADAERKGLAMKQPSGSAGQSIAFSRSEMSDA
SGSNIAANSVIDSSSRSLNLPSGSSWTARAAMPNAMGAVNVPNAQLQAQIQHQQQQMIQL
HKQQQQQQQMAAAAAARSKTPASSNGNVYSDHLTSSASAASKFPNAMSAFPQNLVQTGNN
SSQAQSPQWKNSTRTSTSQAPSSLSSTSSLKNLSQQQVRSQQSHTQISFGTNQKSAAPPQ
GQQPPNNNQSPSSPMMVGSPTTSSISKGASGSPRNANSASASNKTSGQNSSLSTQQGKSS
PSLPNQKSSPAGGRNVPSILGNPHTASTSGSGTKSQMQQQQQQLQQQQQHLQKSMQQAQL
FFSSPYMQAQPPHSTGTNSTGQATGGYYLQRRRSDQPAQQPTGSSTASSSSGMLTLCPVT
LGGGTTSDPAKAIAAAAAASNMKGGVLPSQGILHAAQYTTPTSGSQHQLLPAGFSYVHPV
PAAVQVKPAEQKQPAGNDNLHACWQPEKK
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggataggaacagagaagcaagaagaagtgggggtatggtagcagcggcagctacatct
aatggattgtcatcaagacgtagacatagaactaatagtcttagagattcccctgatgaa
gatgggggtgtagagatacaagaatctgtaaggttaagggaaagagtgaagaaagatcga
gatcgtgaacgagaaagggagcgagaacgagaaagagaaagagaaagggataatagggat
agagatagagatagagataggataagtcggagtaaaaggaggagaggtgaaaggttaatt
ggtggtgttgatgatagttcagaagaaagtgtaaacgatgatgaagaagatgatgatgaa
gatactactacaataactactacaaacaacgttggtgtttcaggtagtagtagtacaagg
ttgttgccgccgaatcctccggtaccggtgacggtggggtccatttcaaaccaccaccat
catcataataaccataatcatactaatcatcatttacagcctccgagaaagagttttcca
ccgaatactacgaaggtttttaggacagcagcagcagcagcagctcctgtttggaaacct
ggtgatgaaatgattggtgtttctgtcccaagaaaagcccgttctgcatctactaagagg
tcacatgattggatttctggggtcagcggtggtggtaatagtaatagtggtgttattaca
ggagagcaaatacatcagcaagtttcgacagcatcgccggtgagacagaatattccggca
acatcaacacaatcaccggcagctcctttatctccatcttcttccaatgtttcagtcaga
aagaaaattaagcctaatggacaaaaaaggccgccggcaaagtcaccaccaaaagcttct
tcatccaacaaccctgaagagctagagattgaaattgctgaagtgttatacgggttgatg
actcagtcacaaggaccttccaagaaagaaagtggaggaggaccaaatgatacgactaga
gaagtcaataacagatccagagtttcatctcctgtttcaaattctaactcgtcagctact
cctttatctgctgttgctccaaagaggaaaagaccgaggcaagtcttggaaaatcctgga
ggatttggtgtaaggagcagccccatttcatcttctacagctactaataaagtggagatg
gatcagacaacaacaatgaagatggaggtttcttctcctaatttggagaagaccccacaa
tctgctgctgaaaatggtgtatctttatatgatttaagtgcttctgtacaaagtttgccg
gttgcatcagatccggtaccggagactatgaaggtggaatccgaggccaagaggaggcct
gaggaatctgaatttatggagagtaaggaggaggtgagggaatcttctactttgggagca
gaaaatagtaatcgtgaggatgctgttgcagttacccaagtgattgtttcagaagttgaa
agtcagagagaggagaagttccagatagatcttatggctcctccaccacagttaagatca
tcacctgaaagggaagctgagatagattttggatcagcagctgtggataagaagcctatt
ttagcagaaaatatagtacaaatgaagcattcagtgagggagaaggataatgagaggatt
ggcaaggctgagaaagaagaagggatcagtgttgaagctgaggaaaagaagacaaaagca
gcagcccttgaggaacttaatcctcataagacaagtgagggtagcaggggtaggaatatt
gatcttcagctagatttggaaaagccagaaaaggatagtggtgtaagtagcaaattccaa
cagcagagtcaaaagttgcagcagcagcagcagcagcagcaccaaccacctccaccacaa
aaagctactaaagaagaaccaattatagaaaaaactggtcaatcaagctctttaccaatg
ccaatgtctatggctagctggcctggtgggcttcctcccatgggatacatggcaccttta
caaggagttgtagctatggatggaaccacagtttcctctgctccaatccagcctctgttt
tctcaaccgcggccaaaaagatgtgcgacacattgttacattgctaggaacatacattgc
cttcagcaattcatgaagatgcatcctttctggccaccagctactggctctgcaccattc
tttggagccaagaccaatctcaatgttctgccgccaacagatctagctgggagagcaagt
gctgggccagataagggtcaggggcttgccattttccctaataatgttggtaaagacaaa
gtccagcctgcaaacatttcagatgctactgctcagagaaagcagcaaatattactccag
caagcattgccacctgttgcgcctaacaatctactgcatgggcctgcgttcatcttccct
ataaatcaacaacaggcagcggcagcggcggctgctgctgtgcgacccggtcccacaaag
tcacctagcacaacgggcactgcagccttgtctaacacatccaatcttactgctggcact
gctgcgtcagcggcagctggtggagctgcctctgcaattagtttcaactacccaaatatg
tctcctaatgaagctcagtacttggcgatcttgcagaataatgcttatgccttcccaata
ccggctgtaggagcacctccaaattatagaggagctcatccgcagcctatgccattgttc
aatgggtctttctattcttcccagatgattcatccatcccaggttcagcaacagcagcag
cagcagccgcctacatcccagtcgcaacaaatgcaacaaggtcaacaaaacacaagcatg
tctagtggatcctcttcatcccagaagcatttgcagagccagcagcagaggtcccaaggc
aatgctgttaatggtggcaatttgcataattttcctgggtcaaagaatcatccatctcag
tccccagcacagtcacataatcagcatattcctcaacagacacgccatattgaaaatgag
gtgggtagcgaggatagcccatcaactacagagaggaaaaggtctcatggacctatgaat
gtgtacaatcagaattttgctatgcccatgcatccctcaaactttggtttgatgactcct
ccagctacttttggtattgcgtcttctgccggtggtggcagtaatcatcaaactgagaag
aagccgcagcaacaacaaggtttaaaaacgagtctagaatcagtgccgcctcaacctttt
gccatgtcatttgcttccttaaatggatccactgctggtccgggcattgacatgtccatg
gcacagaatcatgctatttttcagagtctccctgaagctacgaggcaaaatttacagatg
gctgcagctgctgctcaggctgtgcagcagaagaaaaatttcagaatatccgaggatggt
aaatctggatccagtgaccagactggggctgatgctgaaaggaaaggtttagctatgaag
cagccttcaggaagtgctggtcagtctattgcattttcaaggtctgagatgtccgatgcc
tccggttctaatattgcagccaacagtgtcattgatagctcatcaaggtccttaaatctt
ccatctggttcttcatggactgctcgagctgcaatgccaaatgctatgggagctgtaaat
gtccctaatgcacagttacaagctcaaattcagcatcagcagcagcagatgattcagctt
cataagcaacagcaacagcaacagcagatggctgctgctgctgctgctcggagtaagaca
ccagcctctagtaatgggaatgtctactctgatcacttgacatcgtcggcttctgctgct
tcaaagtttccaaatgcaatgtctgcttttcctcaaaaccttgtacagactggtaacaac
agcagtcaagctcagtcgcctcagtggaagaattctaccagaacatctacgtcccaagct
ccatcttctttgtcatccacttcttctctgaaaaacctttcccagcagcaggttagatcc
cagcaaagccacacacaaatatcttttggcacaaatcagaaatcagctgctcctccacag
ggacaacagccccctaataataaccagtctccctcttcccccatgatggttggctctcct
accacttcttctatctcaaaaggtgcaagtggaagcccaaggaatgcaaattctgcttct
gcaagcaataaaaccagcggccaaaactcatcattgtcaacacagcagggtaaatcctcg
ccttcacttcccaaccaaaagtcatctcctgctggtggaaggaatgtgccgtcaattctt
ggaaaccctcatactgcttcaacttcaggcagtggaactaagtctcaaatgcagcaacag
caacagcaactacagcaacaacagcaacatttacagaagagtatgcagcaagcacaactg
ttcttctcaagtccatatatgcaagctcaacctccgcattctactggtacaaattctaca
ggtcaagctactgggggatattatcttcaaagaaggcggtcagaccagccggctcaacaa
ccgactggttcatcaacggcatcatcgtcaagtgggatgttgactttgtgtcctgttact
ctaggtggtggcaccacttctgatcctgcaaaagcgattgcagcagcagctgctgctagt
aatatgaaaggtggagtcttgccttcgcagggcatccttcatgcggcccaatatacaaca
ccaacatctggaagtcaacatcagcttttgcctgctggtttctcgtatgttcaccctgtt
cctgcagcagttcaagtgaagccagctgaacagaaacaacctgcgggaaatgacaatttg
catgcgtgctggcagcctgagaagaaatga
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integrated database retrieval system
