Nicotiana tomentosiformis: 104116888
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Entry
104116888 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104116888
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104116888
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
104116888
NCBI-ProteinID:
XP_009626137
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All DBs
Position
4:108609440..108614776
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AA seq
650 aa
AA seq
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MIVPNHSQMSTQVLQLLQQQDQVIIDNGVFQLRLTNPGGKIIGIQYNGIDNLLELNNPIL
NGGFWDLNWSEPGTAGTRGKFDEIEGNSFKVIVETEEQIELSFIRTWDPSLQGEHSPLTI
DKRFIVLRDSPGFYSYAIYEHKEDMPAFNLNETRIAFMLSIEKFRYMVMADDRQRLMPHP
KDRVPPRGKELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNKVHGFICLDPPVGFWQ
ITPSNEFRTGGPIKQDLTSHVNPTTLAMFVSTHYGGQDFVIKFGSGEPWKKVFGPVFIYL
NSVADKHDTLSLWNDAKERMHNEVGCWPYSFPSSEDFPKADQRGAIRGRLVVCDRYISKE
YLSAKGAFVGLAPPGDAGSFQRECKGYQFWTNSNDEGHFSIKNVRPGEYNLYAWVPGFIG
DYRYEKSIAVSAASEVDVGELVYEPPRSGPTLWEIGIPDRSAAEFYIPDPNPQYINKLYV
NQPAHRFRQYGLWERYADLYPDQDLVYTVGSSDYRKDWFYAQVTRKVGDKAFEPTTWQIK
FSLDSVDQTGNYTLRIALSSSTQSILEVRVNDSEANPPHFSSGLIGSDNAVARHGIHGLY
WLFNVEVAAGQLLQGENIIYLKQAWSVSALHGIMYDYIRLEAPPLSATHY
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgccaaaccattcccagatgtcaactcaagttcttcagcttcttcagcaacag
gaccaagtgataatagataatggcgtattccaactaagattgacaaatccaggaggaaaa
ataattggtattcaatataatgggattgacaatttgctggagctcaacaacccaatcttg
aatggaggattctgggacttaaactggagtgaacctggaactgctggaacaagaggaaaa
tttgatgagattgaaggtaatagttttaaagtaatagttgaaactgaagaacagatagag
ctctcatttattaggacatgggatccttcacttcagggcgagcattccccgttaaccata
gacaaaaggttcatagtacttcgggattcgcctggtttttactcttatgctatttatgaa
cacaaagaggatatgccagcattcaacctcaatgaaaccaggatagctttcatgctcagt
atagaaaagtttcgatacatggttatggcagatgataggcaaagactaatgcctcaccct
aaagatcgcgtacctccaagaggaaaggaattggcgtatccagaagctgtcctacttgtc
gatcctgtggagccagaatttaaaggagaagttgatgacaagtatcaatattcgtgtgag
aacaaagataacaaagtccatggtttcatttgtttagaccctccagtcggattttggcaa
ataactccgagcaatgagttcagaacgggtggacctatcaaacaggatcttacttcccat
gttaatccgaccaccttggctatgttcgtgagcactcattatggagggcaggatttcgtg
attaaatttggatcaggtgaaccgtggaagaaagtttttggtcctgtttttatatatctc
aattctgtagcggacaaacacgatacactttccctttggaatgatgctaaagaacggatg
cacaatgaagtcggctgttggccttacagtttcccaagttcagaagattttccaaaagct
gaccaaaggggcgccatccgtggtagattagtagtctgtgacaggtacataagcaaggag
tatttatctgcaaagggtgcttttgtggggctagctccacctggagatgctggatcattt
caaagagaatgcaagggctaccaattctggacaaactcaaatgatgaaggccatttttca
ataaaaaatgttcgtcccggggagtataacctctatgcttgggtacctggatttattgga
gattatagatatgaaaaatccatagcagtttctgcagcttctgaggttgatgttggtgaa
cttgtgtatgagcctccaagaagcggtcctacattgtgggaaatcggtattcctgatcgc
tctgctgcagaattctacattcctgaccctaatccacagtatattaacaaactttacgta
aatcaaccagcacacaggtttaggcagtatggattatgggagagatatgcagatttatat
ccagatcaagatttggtatatacagttggaagtagtgactatagaaaagattggttctat
gctcaagtgaccagaaaagtgggcgataaggcatttgaacctacaacctggcaaattaaa
ttcagtttagacagcgttgatcagactggaaattacacactgcgaattgcactctcatct
tcaactcaatcgatattggaggtaagggtgaatgattcagaagcaaatccaccccatttc
tcaagtggattgattggaagtgacaatgcagttgccagacatggaatccacgggctatat
tggttgttcaatgtagaggtcgcagcaggacaactccttcaaggagagaatatcatatat
ctcaagcaagcatggagtgtcagtgctttgcatgggattatgtatgactatattcgtttg
gaagctcctcctctttccgccacgcactattag
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