Nicotiana tomentosiformis: 104117023
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Entry
104117023 CDS
T05025
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03022
Basal transcription factors
nto03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104117023
09124 Replication and repair
03420 Nucleotide excision repair
104117023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104117023
03400 DNA repair and recombination proteins [BR:
nto03400
]
104117023
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104117023
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104117023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
104117023
NCBI-ProteinID:
XP_018633374
LinkDB
All DBs
Position
1:complement(114611369..114624917)
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AA seq
288 aa
AA seq
DB search
MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV
VVIATGYHSCDYVFDSSSSMQRAECLLEKLEEFVDKDESLSQEDSVDGVGFSLLSGSLSM
ALCYIQRVFRTGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDSCVIGSQHS
AFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRAFLQLPRPVGVDFRASCFCHKN
TIDMGYICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQKRNPRW
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgactccggtttcatcaaagctttacacagatgatgtaagcctattgatggttctgatc
gatactaatccgtacttttggagctccatgaagaatactgccttcacattctctaaattc
ctatctcatgttcttgctttcttaaattcaatacttctgctgaatcagatgaaccaagtg
gttgtgattgcaactggttaccattcatgtgactatgtgtttgattcgtctagttcaatg
caaagggctgaatgcttgttggagaaactagaggagtttgtggataaagatgaatccttg
agtcaagaagactctgttgatggagttggattttcacttctttctggttccctttccatg
gctctttgctatattcaacgggtatttcgtacagggcctcttcatccacagcctcggata
ttgtgtctgcatggatcgccagatgggcccggacaatatgttgcagtcatgaatgcaatt
ttctcagctcaacgttcaatggtaccgattgattcgtgtgtaataggatcccagcattct
gcttttcttcagcaggcctcttacatcactggtggtgtatatttgaaaccccaagtatca
gatggactgtttcaatatctctcgacggtgtttgcgactgatttgcattctcgtgccttt
ttgcaacttcccaggcctgtgggagttgactttcgtgcatcgtgcttttgccacaagaac
acaattgacatgggctacatatgctctgtttgtttatccatattctgcaagcatcacaag
aaatgctcaacatgcggatcaaattttggagaggcacgaaagcaggatccctcagcctcg
gatcagaagagaaaccccagatggtag
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