Nicotiana tomentosiformis: 104117028
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Entry
104117028 CDS
T05025
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
nto
Nicotiana tomentosiformis
Pathway
nto02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104117028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nto02000
]
104117028
Transporters [BR:
nto02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
104117028
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
ABC_ATPase
AAA_16
AAA_5
AAA_29
RsgA_GTPase
AAA_25
AAA_28
AAA_33
Rad17
Zeta_toxin
DUF4284
AAA_15
Motif
Other DBs
NCBI-GeneID:
104117028
NCBI-ProteinID:
XP_009626303
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All DBs
Position
3:complement(80891730..80900898)
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AA seq
717 aa
AA seq
DB search
MASTVTNSFCLSLNSAITQRRRNQQVLIRRPSHFSISSTQRPFRPHFISCRKLKRYSAIS
SAYITGPAFDAIVSENDPKFEESDDSLVAVEPIEVISWGFMWKLVSRHKLKLLASVLALI
GCTTCTLTMPLLSGRFFEVLIGTRPEPLLELLSKVGLLYALEPIFTIIYVVNMNSIWEKV
MSSLRAQIFQRVLIQKVEFFDRYKVGELTALLTTDLGSLKNIVSENTSRDRGFRALSEVV
GTLSLLFALSPQLAPILGVLMLAVSILVAVYKRTTVNVFKAHGLVQASIADSVAESFSAI
RTVRSFSGEKRQMSVFARQVLEYESSGIKLGTFRSFNESVTRVAVYISLMALYCLGGSKV
KAGEMSVGIVASFIGYTFTLTFAVQGLVNTFGDLRTAFAATERINSVLSGAEIDEALAYS
LEKDMKQKKVRDEALELYLVNGSNEKKQSTKTRYMSSLKLGSSVRSLAETGDICLEDVYF
SYPVRPDVEILCGLNLMLKCGTVTALVGPSGAGKSTVVQLLARFYEPTRGRITVAGEDLR
TFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEYVSKDDVIKAAKAANAHEFIISMP
QGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSERLVQEALDRLM
KGRTTLVIAHRLSTVQNADQIALCSDGKIVELGTHFELLERKGQYASLVDTQRLAFE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagtactgtaactaactccttctgtctttctctcaactccgccattacacaacgg
cggcgcaatcaacaagtcttaatccggcgaccatctcacttctctatctcttcaacacaa
cgtccgtttcgtccacatttcattagttgccggaaactgaaacggtactccgcgatatct
tcagcttacattacaggccctgcttttgatgctattgtttcagaaaacgatcctaaattc
gaagaatcggatgatagtttagtggcagttgagccaattgaagttatcagttggggtttt
atgtggaaacttgtttctcgccacaagttgaagctccttgcttctgttctcgctcttatc
ggctgtaccacttgtactctcaccatgcctttactttccggaagattttttgaagtactt
attggaacaagaccagagcctctgttggaactgctcagtaaagtgggacttctatatgca
ctggagccaatttttacaattatctacgtggtgaacatgaattccatttgggagaaggtt
atgtccagcttaagggctcaaatttttcagagagtactgattcaaaaggttgagtttttt
gaccgttacaaggttggtgagttaacagctctattaacaactgatcttggttcactcaaa
aatattgtcagtgagaatacttcacgggatcgtggttttagggcattatcagaggtggtt
ggaacattgtccttattgtttgctctatctccccagcttgctccaattttgggcgtactc
atgctcgccgtgtctattttagtcgctgtgtacaagaggacaactgtaaatgtcttcaaa
gctcatggactggtccaagcatccatagctgattctgtggccgaatcattttctgccatt
cgcactgtgaggtcatttagtggggagaagcgtcagatgtcagtgtttgctcgccaggta
ctcgagtatgagagtagtggcataaagcttggaaccttcagatccttcaatgagtcagtg
actagggtggcagtttatatctccttgatggctttatattgtcttggtggaagcaaagta
aaggcaggtgaaatgtcagtgggaattgtggcttcatttatcggatacacttttacatta
acttttgcagttcaaggcctcgtaaatacctttggagatcttcgtacagcttttgcagca
actgagagaattaactctgttttgtctggagctgaaattgatgaagcgcttgcatattct
ttagagaaagacatgaagcaaaagaaggtccgtgatgaggctttagaattatacttggtg
aatggttctaatgagaagaaacaatctaccaaaacaagatacatgtcttccttaaaattg
ggtagcagtgtgcgaagccttgcagagacaggtgatatctgtcttgaagatgtgtatttc
tcgtatccagtgaggcctgatgtggaaatcctttgtggtcttaatttaatgctaaaatgt
ggaacggttacagctctggtgggaccaagtggtgcagggaaaagtacagtagtacaacta
ttagcacgtttctatgagccaactcgaggccgcataactgttgcaggagaagatttgcga
acatttgataagagcgaatgggcacgggttgtctctatagtgaatcaagaacctgttctt
ttctctgtatcggttggagaaaatatcgcttatggtctccctgatgagtatgtatccaag
gacgatgtaataaaggcagccaaggctgccaatgctcacgagttcataatttcaatgcca
cagggttatgacacattagttggtgaacgtggtggtttattgagtggtggacagaggcag
agaattgctattgcaagggctctactgaagaatgcccctattttgattctcgatgaggcc
actagtgctttagacacagtaagtgagcgtctagtccaagaagcactggaccgtctgatg
aagggacgaacaactttggtaattgctcatagattgagcacagttcagaatgcagatcaa
attgctctttgttctgatgggaagattgtggagttgggaacacactttgagttgttggag
aggaaaggccaatatgcttctctggttgacactcagaggctcgcatttgaataa
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