Nicotiana tomentosiformis: 104117226
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Entry
104117226 CDS
T05025
Name
(RefSeq) putative pentatricopeptide repeat-containing protein At3g23330
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104117226
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nto02000
]
104117226
Membrane trafficking [BR:
nto04131
]
Endosome - Golgi transport
Others
Others
104117226
Transporters [BR:
nto02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
104117226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR
PPR_2
GDT1
PPR_1
PPR_3
E_motif
PPR_long
OFeT_1
Motif
Other DBs
NCBI-GeneID:
104117226
NCBI-ProteinID:
XP_009626541
LinkDB
All DBs
Position
3:complement(11816526..11831090)
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AA seq
884 aa
AA seq
DB search
MGLQSNPRNIWILRPNFSFLVLLLLITSPLVSAQEAGEENERVESGGRFKDLGRRSKIIV
EKLKTGVIRGENDPDFVDVPLDLDSGLGIFDAFFASFSMILVSEIGDETFIIAALMAMRH
PKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSSD
SKASQKKEIEEVEEKLEAGQGKAAVRRFFSRFCTPIYLESFILTFLAEWGDRSQIATIAL
ATHKNAIGVAVGAIIGHTICTSVAVVGGSMLASRISQRTVATVGGLLFLGFSLSSYFYPP
LYVSSFSSKFLINPKFVEVIHANKIKDGSAQNSSSSNYILYLYTKSYHLASAQKLFDEIP
QRDVRTWTILISGFAQYGCYRNALWLFVKMQKEGNVIPNEFTLSSVLKCCSSVSNGLRLG
KSIHGWMLAAAVYLDVALENAVLDLYVKCAALDYAKRLFELMGDKNAVSWNIMLAGYLSI
GDMEKSIKLFKKMPEKDVSSWNTIIDGLMRRGFEYDALELLCQMTSCGPSFNKVTFSISF
ALMSSLRNLELGRQLHGKVRRLLIYEDALVRASLIDMYCKCGQMEKASRIFQELHQGAVE
VQYSHSVPWSTIISGYIHNGMLKDALEVFCSMVRDQLEVDVFTLSSILSACANSELLELG
QQIHGYVQKLGHIWDIFLISAIIDMYAKCGKLNAAWLSFEQTQSRNIVVWTTMINSYAIH
GKGAEAVQLFELMLNQRIAPNEVSFVSVLTACSHAGLVKDGCKYFRLMKQVYGINPCVEH
FTCMVDLFGRAGCLEEAHDFIHKNRISNMTQIWKVLLSSCLVHKNVKMARRASEKLLQLQ
PREDSPYILLSNTCSDNDNWDEASKIRVLMKERKVMKLPGQSWI
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcaatcaaacccaagaaatatatggattcttcgtcctaatttttcattccta
gtccttttacttctcatcacttcccccttggtctctgctcaggaagctggggaggaaaat
gaaagagtggagtcaggtggacggttcaaagatctgggaaggcgtagtaaaattattgtt
gaaaaacttaagactggtgttataaggggtgaaaatgatcctgattttgttgatgttcct
ttggacttggattctggccttgggatctttgatgccttttttgctagtttttccatgatc
cttgtcagtgagattggtgatgagacattcataatagcagctctgatggcaatgcgtcac
ccgaagtcaattgttttgtctggtgcactcagtgccttgtttgttatgacaatactgtct
actggacttggtaggattgtgccaaatttgatatcaaggaagcatacaaacagtgcagct
acagttctttatgccttttttgggcttcggcttctctacattgcgtggaggtcatcagat
tcaaaagcttcccagaaaaaggaaatagaggaggttgaagaaaaacttgaagctggacag
gggaaagcagcagtcagacgtttcttttccagattttgtacgcctatatatttggagtcc
tttatcttgacctttctggcagagtggggagaccgtagccagatagcaacaattgctcta
gctacacacaaaaacgcaattggagttgctgttggggctataataggacacactatatgt
acttcagtggcagtggtgggtggaagtatgcttgcatccaggatctcacagcggacagta
gcaacagttgggggccttcttttccttgggttttccttgtcatcatatttctatccgcct
ctttatgtatcttctttttcatcaaaatttttaattaatcctaaatttgttgaagtcatt
catgccaataaaataaaagatggctcggcccaaaactcctctagcagtaactatatattg
tatctctacacaaaaagttaccatttagcctccgcacagaaactgtttgatgaaattcct
caaagggatgttcgaacgtggacgatactcatttcgggttttgctcaatatgggtgttac
agaaatgcattatggttgtttgttaagatgcagaaagagggcaatgttattcccaatgag
ttcactttatctagtgtcttgaagtgttgttctagtgttagtaacgggcttagattgggc
aagtctatacatgggtggatgcttgctgctgcagtgtatttggatgttgctttggagaat
gctgtacttgatctttatgtcaaatgtgcggctttggattatgcaaaacggttgtttgaa
ttgatgggtgataaaaacgcggtatcttggaatataatgctagcgggatacttgagtata
ggagatatggagaagagtataaaactttttaaaaagatgcctgaaaaggatgtttcgagt
tggaatacaatcattgatgggcttatgcgacgtgggtttgaatatgatgcccttgagctc
ctatgtcaaatgacctcatgtgggccttcgtttaacaaagttacgttttctatatcattc
gcattgatgtcttcgcttagaaatctcgaattagggaggcaactccatggtaaagtgagg
aggttgttgatatatgaagatgcgcttgtgagggcctcgctaattgatatgtattgcaaa
tgcgggcaaatggagaaggcttctaggattttccaagaattacaccaaggtgctgtggaa
gtacaatattcacattctgttccgtggagtacaattatatcaggttatattcacaatggc
atgctgaaagatgctttagaagttttttgctccatggtgcgtgatcaattggaagttgat
gtgtttacactgtcaagcattcttagtgcttgtgcaaatagtgagcttttggaacttggg
cagcagattcacggctatgtccaaaaacttggacacatatgggacatatttttgatttca
gcaattattgacatgtatgccaaatgcggaaagttaaatgctgcttggttgtcttttgag
caaacccaatctcggaatatcgtggtgtggacgactatgataaacagttatgctatacat
ggaaaaggagcagaggctgttcagctttttgagcttatgttgaatcagaggattgcacca
aatgaagtaagtttcgttagcgtcttaactgcatgtagtcatgcaggtttggtgaaagac
gggtgcaagtattttaggttgatgaaacaagtttatggcatcaacccttgtgtcgaacat
ttcacttgtatggttgatctttttggccgagcaggctgtttagaggaggctcatgatttc
attcataagaatagaatctctaacatgacccaaatttggaaggtactcttatcttcttgc
ttggttcacaaaaacgtaaagatggcaaggcgtgcttctgagaaattgctacaacttcag
ccacgtgaagacagtccttacattctgttgtcaaatacttgttcagacaatgacaattgg
gatgaagcatcgaaaataagggtcttgatgaaggaaaggaaagttatgaaactcccaggt
caatcatggatttag
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