Nicotiana tomentosiformis: 104117625
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Entry
104117625 CDS
T05025
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104117625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104117625
03036 Chromosome and associated proteins [BR:
nto03036
]
104117625
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104117625
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104117625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
RMC1_N
Ge1_WD40
Beta-prop_VPS8
CFAP43_N
WDR54
DPPIV_N
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
104117625
NCBI-ProteinID:
XP_009626994
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All DBs
Position
6:complement(64686445..64689077)
Genome browser
AA seq
454 aa
AA seq
DB search
MDTGYLSSTSASKTRSRCPLQEQLLHRRNSSQNLDRFIPNRSAMDMDYAHYMLTEAKKGK
ENPAVNSPSREAYRKQLAETFNMNRIRILAFKNKPPTPVEAFPNEFSSSVQQAKPAKPRR
HIPQTSERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVSVDEDN
GPVTSVKWAPDGRHIAVGLNNSDVQLWDTTANRLLRTLRGGHRSRIGALDWNNHILTTGG
MDGQIINNDVRVRSPIVDTYQGHHQEVCGLKWSTSGQQLASGGNDNLLHIWDRSMASSNS
TTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGSDRSIKFWNTHTGACVNSIDTGSQVC
ALLWNKNERELLSSHGFTKNQLTLWKYPSMVKVAELTGHTSRVLFMAQSPDGCTVASAAG
DETLRFWNVFGTPEVAKPAPKANPEPFAHLNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggatatttgagttctacatcagcaagtaagaccagatctcgttgccctctt
caggaacaacttcttcacaggagaaattctagtcaaaatttggataggttcattccgaat
cgatcagcgatggatatggactatgcacattacatgttgacagaggcaaaaaaaggtaag
gaaaatccagctgttaactctccctccagagaggcatataggaagcagcttgcagaaaca
ttcaacatgaacagaattcgtatactggcattcaagaacaagccacccactcctgttgag
gcctttcccaatgaattctcatcatctgttcaacaggccaagcctgctaaaccccgtcga
cacattcctcagacttctgaaaggacactagatgctccggatctagtggatgactactat
ttgaatttattagattggggcagcagcaatgttctttctattgctctaggcagcactgta
tatctgtgggatgcatctgatggtgccacttcagagctggtctctgttgatgaagacaat
ggtcctgttacaagtgtaaaatgggctcctgatggtagacatattgctgttggtctgaac
aattctgatgttcagctctgggacacaaccgcaaatcgactgctgagaactttgagaggt
ggtcaccgatcccgaattggcgctctagattggaacaatcacattttgacaacaggggga
atggacggtcagatcataaacaacgatgtgagagtgagatccccaattgttgacacttac
caaggacatcatcaagaagtttgtggtttaaaatggtcaacctctggacaacaattagct
agcggtggaaatgataaccttctccatatatgggacagatcaatggcttcttccaactct
acaacacagtggcttcacaggcttgaagatcacacagctgctgttaaggcccttgcttgg
tgtcctttccagggtaatttattagcctctggtggtggtggaagtgaccggtccattaag
ttctggaacactcatactggtgcttgcgtgaactctattgatacgggatctcaggtttgt
gccctgctatggaacaagaatgaacgcgagctcctaagttctcatggtttcactaagaat
cagctcactctttggaaatatccttccatggtaaaggtagccgagcttactggtcacaca
tccagagtacttttcatggcacaaagtccagatggttgcacagtggcatctgcagctggg
gatgaaactcttagattctggaatgtatttggaactcctgaagttgcaaagcctgcacca
aaagcaaatcctgagccatttgctcacctgaaccgtattcgatga
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