Nicotiana tomentosiformis: 104117663
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Entry
104117663 CDS
T05025
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104117663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104117663
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104117663
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
104117663
NCBI-ProteinID:
XP_009627031
LinkDB
All DBs
Position
3:82957666..82962222
Genome browser
AA seq
200 aa
AA seq
DB search
MVTSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYFKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPNWQIGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIHP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaacttcatcggttgtgaacacatacccactgtccagttatacatttggtactaag
gagcccaaaatggagaaggatacctccgtcgccgatcgccttgctcgtatgaaagtcaac
tattttaaggagggcatgaggactagtgtcgaaggaattctgttggtacaagaacataat
catcctcatattcttcttctgcaaattgggaacacattctgcaaacttccaggtggacgc
ctgaaaccaggagagaacgaaatcgagggtttgaaaaggaaactctccagcaaacttgca
gctaattctcctggtcttcagccaaattggcagattggcgagtgtgtggccatctggtgg
aggccaaactttgagactataatgtatccatattgccctccacacataacaaaacccaag
gagtgtaagaagctctttgttgttcatctatctgaaagagagtactttgcagtcccaaaa
aatctgaagcttcttgctgtgccattgtttgaactttacgacaatgttcagagatatggt
cccgtgatatccacaattccccaacagctttccagattccagttcaacatgatccacccg
tag
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