Nicotiana tomentosiformis: 104117707
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Entry
104117707 CDS
T05025
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104117707
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104117707
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104117707
NCBI-ProteinID:
XP_009627088
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All DBs
Position
3:10429124..10437624
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AA seq
496 aa
AA seq
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MPPVTSIFLFCFITSFFSLISATLNLTLPHQQPFPESVVQDVQRRVNESIARRQILETTV
RDSSNKCLTGNPIDDCWQCDSNWAKNRQRLADCAIGFGQGAMGGKNGQIYVVTDSSDRDT
VNPTPGTLRHAVVQEEPLWIVFAADMVIKLKHELIVNSYKTIDGRGANVHITGGGCITLQ
YVSNVIIHNVHIYNCVPSGNTNIRSSPTHVGYRGKSDGDGISIFGSRNIWVDHCALSHCT
DGLIDAIMGSTAITISNSYFSHHDDVMLLGHDDKYLPDSGMQVTIAFNHFGEGLVQRMPR
IRRGYVHVVNNDFTEWQMYAIGGSASPTINSQGNRYTAPDDPNLKEVTKREDTDTGKWND
WNWRSDGDVMVNGAFFVPSGQGISTQYVKAYSVDPKSALLIDQLTKNAGVLGGPRDNSMS
MSSKGGITGGGGGHAESTSGDVDMFGMIFSGTGASSAGSSPSPTTTPILLSFLIILTLYI
ITKQGGQLSIPLFLLL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagttactagcattttcttattctgcttcattacttcctttttctctctaatt
agtgccaccctcaatcttacccttcctcaccagcaacctttccctgaatctgtggttcaa
gatgttcagaggagggtaaatgagtccattgcgagaagacaaatacttgaaacaactgtt
agagatagtagtaataaatgtctaaccggaaatccaatagacgattgctggcaatgcgac
tcaaactgggctaaaaaccgacaaaggttagcagactgcgccattgggttcggtcagggt
gcaatgggtgggaaaaacggtcagatctacgtagtcaccgactcctccgacagagacacc
gttaaccctactccgggcactctccggcacgccgtcgttcaagaggaacctctctggatc
gtgttcgccgccgacatggtcattaagctaaaacacgagcttattgtgaacagctacaaa
accatcgacggccgcggcgcgaacgttcacattaccggcggcggatgcataacgttacag
tacgtgagcaatgtgattatacataatgttcatatttacaattgtgtcccttcgggtaat
actaatatacggtcgagtccaacgcatgttgggtatagaggcaaatcggacggtgatgga
atatccatatttggatctcggaatatttgggttgatcattgtgcattgtctcattgtacg
gacggcttgattgatgctattatggggtccactgctattactatttcgaatagctatttt
agccatcatgatgatgtcatgctcttgggacatgatgataaatacttgccagattcagga
atgcaggtgacaatagcgtttaatcattttggagaagggttagtgcaaagaatgccaagg
attagaagaggatacgtacatgtggttaacaacgatttcacagaatggcaaatgtatgca
attggtggtagcgcaagtcctactattaatagtcagggcaatcgctatactgctcctgat
gaccctaatttgaaggaggtgacaaagcgggaagacacagacactgggaagtggaacgac
tggaactggaggagtgatggcgacgttatggttaatggtgcattttttgtgccttcaggc
caaggcattagcacccaatatgtcaaagcttacagcgtcgaccccaaatccgcccttctc
atcgatcagctcaccaaaaatgccggtgtccttggtggtcccagggataacagtatgagc
atgtcatccaaagggggcattaccggaggcggcggcggtcatgccgagtccactagcggc
gatgttgacatgttcggaatgatattcagcggtactggtgcatcttctgcaggatcatca
ccatcacctacaaccactccgatcttactgtcctttttaattattctgacgttgtacata
atcaccaaacaaggtggtcaattatctataccattatttctcttgctatag
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