Nicotiana tomentosiformis: 104117715
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Entry
104117715 CDS
T05025
Name
(RefSeq) pumilio homolog 1-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
nto
Nicotiana tomentosiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
104117715
NCBI-ProteinID:
XP_070031080
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All DBs
Position
5:complement(65696720..65725528)
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AA seq
1015 aa
AA seq
DB search
MITDSYSKMISMVGGSNDFNDRERELSMLRSGSAPPTFEGSLSAFADFGGLSEELRSDPA
YIAYYYSNVNLNPRLPPPLHSKEGWLFVQRLQGTNAAANGSSVALGDIGDKRKLIRGDKG
ADDRSLFSMQLGFCQEDGDVGKEDEKEWRGDGLIGLRGLGLGSQQKSIAEMIQDGRSQAT
STARHPSCLPSRAFDDVVDPSGSQFAHLHHELASLDALHSQAKIQGTTALQSVTTSVCQS
YASALGASLSRSTTPDPQLVARAPSPRISSAGGGRRSSIDKRNVNVPNTSENVPSNMGEH
ADLVTALSGMGLSVHGMGDVRKHQNTQNHNEIDNHQNLFHLQRDQNPMKQHSYANKSESV
QFRKSACSSAASYLKGPSTPTLTSGGSSPSQYPTTDNPNSMFSPYGLGGYDMNPSSPSML
ENQLGGGNFPSLFENISAGVTMGACGIDPRAMAGGLNFCPNLLAAAAELQNINRLDGQTL
GRSLQIPQVDPMYLQYLRSTEYLSAQLSAVNDPTVNRESLGSSYMDLLELQKAYFGVLLA
SQKSEYGLLCLGKSGGLNNGYYGNIALGVNMSYPGSPLAGAALHNSPFWPGSPVRYGERN
MHFPSGMRNLSGVMGAWYSESGSNLGESFASTLLDECKSNKSKCFELLEIEGHVVEFSAD
QYGSRFIQQKLETATTGEKNMVFCEIMPQALSLVTDVFGNYVIQKFFEHGSASQIRELAD
QLNGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVTELDGHVMRCVRDQNGNHVIQKCIE
CVPEDAIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHNPETLSIVMKEILQSVCMLAQ
DQYGNYVVQHVLEHGNPEERTSIINKLMGQIVQMSQQKFASNVVEKCLSFGTPEERQTLV
NEILGSEDENDPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKH
IVARAEKLVAAGGSNVAIVKSRSLHSQNYSSALSKLPTRRNNPISCIFILSMSCH
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgattactgatagttattcaaagatgatatcaatggtaggaggaagcaacgattttaat
gatcgggagagagagctaagcatgttgcgaagcggttctgctccgcccacttttgaagga
tcgcttagcgcttttgctgattttggtggcctttcagaggaattaaggtctgatccagcc
tacattgcctattactactccaacgtcaacctaaaccctcgcctgccgccgcctcttcac
tccaaagagggctggctgttcgtgcagcgtctccaaggtactaatgctgcagctaatggt
agttctgtggcattaggggatattggagataagaggaagttgattcgaggtgataaggga
gctgatgataggtcacttttttcgatgcagttgggattttgtcaggaagatggagatgtt
ggaaaggaggatgagaaggaatggcgcggagatggacttattgggttacgtgggcttgga
ttaggaagccagcagaagagcattgctgagatgattcaggatggtagaagtcaagcaaca
tctactgcgaggcatccatcttgtctacctagccgtgcattcgatgatgttgttgatcct
tctggatcccaatttgctcatctccatcacgagttggcatctttggatgcattacattct
caggcaaagattcaaggcacaactgcactccaaagtgtcaccacatcagtctgtcaatct
tatgcttctgctttgggcgcatcattgtcacgaagtaccacccctgaccctcagcttgta
gctagagctcctagtcctcgtatttcttctgctggaggagggaggagaagctcaatagat
aaaagaaacgtaaatgtccctaacacatcggagaacgttccatctaatatgggggagcat
gctgatctggtaactgcattgtctggcatgggtctgtcagtgcatggtatgggagatgta
cgaaagcatcaaaatactcaaaatcataatgagattgataatcatcagaacctctttcat
ctgcagagggatcaaaatcctatgaagcagcattcctatgcgaacaagtctgaatcagtt
cagtttcgtaaatctgcatgttcatctgctgcttcatacttgaaagggccttctacccca
actctcactagtggaggaagttcaccatctcaatatccaactactgataatcctaattca
atgttttctccatatggtttaggaggttatgatatgaacccttcatcaccatcgatgttg
gaaaaccaacttgggggtggtaattttccttcattatttgaaaatatttctgctggggta
acaatgggtgcctgtggaattgatcctcgagcaatggcaggaggcttgaatttttgtcct
aatctattggctgctgcagctgaattacagaacattaatagacttgatggtcagaccttg
ggtagatcactgcaaatacctcaggtggatcccatgtaccttcagtacttgagatcaact
gagtatctttctgctcagctatcagctgttaatgacccaactgttaacagggaatctcta
ggcagttcatacatggatttgcttgagcttcagaaagcatattttggggtactgcttgca
tctcaaaaatcagagtatggtcttttgtgtcttggaaaatctggtggcttaaataatggt
tactatgggaatatagcacttggcgttaatatgtcatatcctgggagccctttggctggt
gcagctcttcacaattctcccttttggcctggtagtcctgtaaggtatggcgaaaggaac
atgcattttccttcagggatgaggaacttatctggtgtaatgggagcttggtattccgag
tctggttctaacttgggagaaagctttgcttcgacattattggatgagtgtaagagcaac
aaaagtaagtgttttgagttgttggagattgaaggccatgttgttgagttcagtgcggac
cagtatggaagcaggttcattcaacagaagttggagactgctacaacaggggagaagaac
atggtcttctgtgaaattatgccacaagctctttcattggtgactgatgtgttcggtaat
tatgtgatccagaagttttttgaacatggaagtgcatctcagattagagaactagctgac
cagctcaatgggcatgttctaacactttctcttcaaatgtatggttgccgagtgatccag
aaggccatagaggttgttgatctggaccagcaaaccaaaatggtcacagagcttgatggt
catgttatgcgctgtgttagagatcagaatgggaatcatgttatccagaagtgtattgaa
tgcgttccagaggatgccatccagttcattatttccacattttatgatcaagttgtgaca
ttgtccacccatccatatggatgtcgggtcatacagagagtcttggaacactgccataat
cctgaaacactgagcattgtcatgaaggagattttgcaatctgtttgcatgctggcgcaa
gatcaatatgggaattatgttgttcagcatgtattggaacatggaaacccagaggagcgc
acttctataattaacaaactgatggggcagatagttcagatgagccagcagaaatttgcc
tcgaatgttgtggagaagtgtttatcctttggaactcctgaagaacgccagaccttggta
aatgagattcttggctctgaagatgaaaatgatcctcttcaggtgatgatgaaagatcag
ttcgcaaactatgttgtacagaaagtgctggagacgtgtgatgaccagcaacttgaactg
attctcaaccgaataaaggttcatctaaatgctctgaagaaatatacctacggaaagcac
atagttgcccgtgcggagaaactagttgctgctggaggatccaatgttgcaattgttaaa
tctaggtcactgcactcccagaattattcatctgcgctttccaagttgccaacgagaaga
aataaccctatttcttgcatttttatcctctctatgagttgtcattga
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