Nicotiana tomentosiformis: 104117830
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Entry
104117830 CDS
T05025
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104117830
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104117830
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104117830
NCBI-ProteinID:
XP_070044266
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Position
11:complement(87526330..87528714)
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AA seq
440 aa
AA seq
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MASISGNSVLLILLISLASLVPNLHAQIAEFDAYLENKAKEALNSSLAAYNEHPEQVTNT
FNREVGDTLLNITSLRRHLKEKSSCMATNPIDRCWRCDENWAKNRKKLADCARGFGHKTT
GGKAGRYYVVTDDSDDDVKDPKPGTLRHAVIQEEPLWIIFEKSMIIRLKQELMITSDKTI
DGRGVSLHIAYGAGFTIQFVHNVIIHNIRIHHIISTSGGMIRDSGKHIGIRTVSDGDGIS
IFGSNHIWIDHCTLSQCTDGLIDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGKGLIQRMPRCRWGFFHVVNNDYSHWQMYAIGGSANPTIISQGNRFKAANNP
NTKQVTKRDYAPESVWKNWQWVSEGDLFLNGAYFVESGPQNKKKSALTKPHRIKFKPGSY
AGRLTRYAGVLIKCKAGTPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcctctattagtgggaattcagttttgttaatattgcttatatcgttagcttcatta
gtccctaatttgcatgcccaaattgctgaatttgatgcatatttggaaaacaaagctaag
gaagcgctcaattcttctcttgctgcatacaatgaacatcctgagcaagtcactaataca
ttcaatagagaagttggagacacattgctaaatattacaagcttaaggaggcatcttaaa
gaaaaaagtagttgcatggcaaccaatccaatcgacagatgctggaggtgtgacgaaaac
tgggcgaaaaacaggaaaaagctagcagattgcgctcggggatttggccacaaaacaaca
ggtggtaaagcaggaaggtactatgttgtaactgatgactcggatgatgacgtgaaggat
ccaaagccggggacccttcgtcacgctgtgatccaagaggagccattgtggattatcttt
gagaaatcaatgataattaggttgaagcaagaactgatgattacgagtgacaagacgatc
gatggcaggggagtttcccttcacattgcctatggtgctggtttcactatccaatttgtg
cataatgttataatccacaacattaggattcatcatatcatatctacctcaggtggaatg
ataagggattctggtaagcatattggaattaggacagtgagtgatggtgatggtatttct
atttttggttcaaaccatatttggattgaccattgcactttgtcccaatgtactgatggc
ctcattgatgccatcatggcttccactgcaatcaccatttctaactgcaaattcaatcat
cacaacgacgtgatgcttttgggggcaactgatgccttccctcaagattcaataatgcaa
gtcactgttgcattcaatcggttcggaaagggattgattcaaaggatgccaaggtgcagg
tggggattcttccatgttgtcaacaatgactactctcattggcaaatgtatgcaattggt
ggcagcgctaatccaaccattatcagccagggtaatcgtttcaaggccgctaacaaccct
aacactaagcaggtgactaagagggattacgcgccagaatcggtgtggaagaactggcaa
tgggtatcagagggtgatttgtttttaaatggagcttatttcgtggagtcagggccacaa
aacaagaaaaaatctgcattgactaaacctcataggatcaaattcaagcctggttcatat
gcaggccgactcactcgctatgctggtgtactgatcaaatgcaaagccggcacaccttgt
taa
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