Nicotiana tomentosiformis: 104117976
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Entry
104117976 CDS
T05025
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104117976
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104117976
Enzymes [BR:
nto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104117976
Protein phosphatases and associated proteins [BR:
nto01009
]
HAD phosphatases
Fcp/Scp phosphatases
104117976
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104117976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104117976
NCBI-ProteinID:
XP_009627526
LinkDB
All DBs
Position
10:23992350..23998411
Genome browser
AA seq
1236 aa
AA seq
DB search
MEECNTAAVGDVEEGEISDSASVEEISEDAFNKQQDPPTSTATTKVVNSNNHNQNQNQNS
STRVWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLNELFVMTTDDNSKQSVESSSDMV
EKVIIDVDDDAMEEGELEEGEIDLDAEVLVVNAGATNNDDQLDSFQTSNVIREQLLSVTI
DEMEKSFPVVCSKLQNSLDSVRELAASPDSDDLVRLFMTAIQTVNSVFCSMNQNQKEQNR
EILSRLLLHAKSQVPSLLSSEQLKEVDAVILSINQSAVSSITEDNDRDNGIKVVEVLDMN
DSHTSSENANQDSTSLKKCDLDVESTKSSGPKEQNVSFESLKPGLANSKARRLSVPLLDL
HKDHDIDTLPSPTREIALIFPIAKASTQAHGVVKPELPMFTGVLEKGSSLLHPYETDALK
AVSSYQQKFGRSSLFVSEKFPSPTPSDEGDSGEGDTGGEVSSSNVGHNASILNTSSTWLP
IVSSVPPTNILAGQGLGTARNADPLSFLPNPSLRSSTAKSRDPRLRLATSEAAAQNLNMK
MLPIPNIDLKLEASLEMIQSRKQKIAEQPAFDASLLKRQRSEQTDSIIVSDVRPSTGNGG
WLEHRGTAGLPITSSNYVTDSSGNGTRKLEQVTSSVSTSNTMPSVIVNADVNLPLTGTSA
NLHSLLKDIAINPSIWMNIIKLEQQKSADDSKTTTLASSSSSILGAVPSTNVAASRTSMI
GQRSVGIIQAPTQTAAADEVAKVRMKPRDPRRVLHNTAVQKSGNVGSADQCKTGVAGTQA
MTSSHCVQRPEDQLDRKSAVTPSTTPPDIARQFTKNLKNIADMISVSPTSTSPAAASQTP
TQHMQVHPSRLEGNGAVSESSELLTDAGLASGKAPPDSLQPQSSWGNVEHLFEGYSDQQR
ASIQRERTRRLEEQKKMFSVRKLCLVLDLDHTLLNSAKFVEIDPVHQEILRKKEEQDREK
PYRHLFRFLHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKLYATEMAKLLDPKGDLFA
GRVISRGDDGDPLDGDERIPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIY
FPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQNFFEHRSIDEADVRNILAT
EQQKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCSSQIDELVTHVVANSLGTDK
VNWALSTGRFVVHPGWVEASTLLYRRANEHDFAIKP
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatgtaatacggcagcagttggagatgtagaggagggtgagatctcagattcg
gcatcggttgaagaaatcagtgaggatgccttcaataagcaacaagacccacctacatct
actgctactactaaggttgtcaattcgaataatcataatcaaaatcaaaatcaaaattcg
agtactagggtttggaccatgagagatgtatataagtacccaatctcgagggactacgca
cggggtttgtataacctggcttgggctcaggccgtgcagaataagcctttaaacgaactc
ttcgtcatgactactgacgacaactccaagcagtctgtggaatcttcttctgatatggtg
gaaaaggtcatcattgatgttgacgacgatgctatggaggaaggagaattggaggaaggc
gagatcgacttggatgctgaggtccttgtggtaaatgctggtgctaccaataatgatgat
caacttgactcctttcaaacttcaaatgtgattagggaacaacttcttagtgttactata
gacgaaatggagaaatcctttcctgtggtctgttccaaattgcaaaactcattggacagc
gtgagggaactagctgcttctccagattccgacgatctggttcgactgtttatgactgca
attcaaaccgtaaattctgttttctgctccatgaaccagaatcagaaggaacagaacaga
gagattctatctaggttacttcttcacgcaaagagccaagtaccttctcttttgtcttct
gagcagttaaaagaggtggatgcggtgattctctctataaaccagtcagctgtttcttca
attactgaagacaatgaccgggacaatgggatcaaagttgttgaagtgttagatatgaat
gattctcatacatcttctgaaaatgcaaatcaggattctacttctctaaagaagtgtgat
ttagatgttgagtctaccaaatcttcaggtcctaaggagcagaatgtgtcatttgaatct
ttaaaaccaggattagccaattctaaagctagacggttatctgttcctctgctagatctc
cataaggaccacgatatagatactcttccgtcgcctacacgagaaattgcactaatattc
cctattgcaaaagcatccacgcaggcacatggagtggtgaaaccggagttgcccatgttt
acgggtgttcttgagaaagggagctccttattgcatccttatgaaactgatgcccttaaa
gctgtttcctcctatcaacaaaaatttggtcgaagttccctttttgttagtgaaaagttt
ccaagtccaaccccatccgatgagggtgatagtggggaaggggacaccggtggggaggtt
tccagttctaatgttggacataatgccagcattctgaatacatctagcacttggctacca
atagtttcttctgttcccccgacaaatattctggctggacaaggacttggaactgctcgg
aatgcagatcctcttagttttctgccaaatccttctttgcgatcttctactgcaaaaagt
agagatcccagactcagattggcaaccagcgaggcggctgctcagaacttgaatatgaag
atgttgcctatcccaaacattgatttaaaattagaggcttctttagagatgatacaatca
agaaagcagaagatagcagagcaaccagcttttgatgcttcattgttgaagagacaaaga
agtgaacagactgactcaatcattgtgagtgatgtgcgaccttcgactggaaatggtggt
tggttagagcatagaggaactgcgggattgccaattacgagtagtaactatgttacagat
agcagtggcaatggcactaggaaattggagcaagtaacaagtagtgtctctactagcaat
actatgcccagtgtcatagttaatgctgatgtgaacttgccattgactggtacttctgca
aatttgcattctctattaaaagacattgctataaatccatcaatatggatgaatataatc
aagttggaacagcagaaatctgcagatgattctaaaactaccacactagcttctagttct
agctctattcttggagcagttccatcaacgaatgtagctgcttccagaacttctatgatt
gggcagagatcagttggaataattcaggctcctacacagacagcagcagcagatgaagtg
gctaaagtccggatgaaaccccgcgaccctcggcgtgttcttcataatactgcagttcaa
aagagtgggaatgttggatctgctgatcaatgtaaaacgggtgtagcaggcacacaagcc
atgacaagcagtcattgtgtccaaaggccagaagaccagttggatagaaagtcagctgtg
acaccttctactacaccaccagacattgctcgccaattcaccaaaaatttgaaaaatatc
gctgatatgatctctgtttcaccaacatccacgtcaccagcagctgcttctcaaactcca
acacaacatatgcaagttcatccgagtagattggaaggaaatggggcagtttctgaatca
agtgaactgctgactgatgctggcttagcttctggaaaagctcctcctgattcattgcaa
ccgcagagctcttggggaaatgttgagcatctatttgaagggtatagtgaccagcagaga
gcttctattcagagagaaaggactaggaggcttgaggaacagaaaaaaatgttttctgtt
cggaagctctgtcttgtcttggacttggaccatactcttctcaattcagcaaagtttgtt
gaaatcgacccagtccatcaagagatcttgaggaagaaagaggaacaagaccgtgaaaaa
ccttatcggcacctcttccggtttctgcacatgggaatgtggacaaaattacggcctggg
atctggaatttcttggaaaaggctagcaagctttttgagctgcatctctataccatgggg
aacaagctatatgccacggagatggcaaaattgctagatccaaaaggggatctgtttgct
ggacgagtgatctccaggggtgacgatggagatccacttgatggggatgaaaggattcct
aagagtaaggacttggagggggttttgggcatggagtctgctgttgtgattatagatgat
tctgtgagagtctggccacataacaagctaaatttgattgttgtggagaggtatatttac
tttccttgcagtagacgacaatttggtctccctggtccttctcttcttgagattgatcat
gatgaaagaccagaagatgggacattggcctcttgtttgggggttattcaaagaatacat
cagaatttttttgaacatcggtccatagatgaagctgatgttaggaacatcttagccaca
gaacaacagaagattctggcaggttgccgtattgtcttcagcagagtatttcctgttggt
gaagccaatcctcatttgcatcctttgtggcagacagctgaacagtttggtgctgtctgc
agtagtcaaattgatgagctggttacccatgtggttgccaattctcttgggacagacaag
gttaactgggcgctttccactggtcgatttgttgttcatcctggctgggtggaggcatca
actttgctttatcggagggcgaatgaacatgattttgctattaaaccttaa
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