Nicotiana tomentosiformis: 104118291
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Entry
104118291 CDS
T05025
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
104118291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nto03011
]
104118291
Ribosome [BR:
nto03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
104118291
Bacteria
104118291
SSDB
Ortholog
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GFIT
Motif
Pfam:
RLSB_S1
S1
DUF8529
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
104118291
NCBI-ProteinID:
XP_009627805
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All DBs
Position
4:95649045..95657575
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AA seq
520 aa
AA seq
DB search
MPIFLLPCKSFSILNPILPLNTSVIYNTATKFSIFSTPPKYPLVKTPKFSKNLSSHWNSQ
ISLHTHVSFCSKNEILEEFSTTQLAKVPEIEESEELELLNKPYLKQINNGVGAEIEEEPK
KVSKDEVLEPFYKLFKPREESLEQESSDTEDTEQEEEEVHSVEAESKKISVEYYEPKPGD
LVVGVVVSGNENKLDVNVGADLLGTMLTKDVLPLYDKEMGYLLCDLEKDAEEFLVRGKMG
IVSYDEAIECGESMSGKPVVEPGTVLFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKQ
LNEPIEVVITEWNTGGLLTRIEGLRAFLPKADLMNRVNSYTELKENVGRRINVLITRINE
ETNDLILSEKEAWQMLNLQEGVLVEGTVKKLFPFGAQIRIGETNRSGLLHISNVTRGEIT
SINNLLAVDEKVKVMVVKSMFPDKISLSIAELESEPGLFLKDKEKVFAEAKEMAKKYRQN
LRTVSATRKPEPLPTDRLPFEDEESLYANWNWFKFERDTV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttttcttcttccatgtaagtctttctctatactcaatccaattctgcccctc
aacacttctgttatttacaatactgccaccaaattctcaattttttccactcccccaaaa
tacccacttgttaaaaccccaaaattttccaagaatttgtcttcccattggaattctcaa
ataagtttacatacccatgtctcgttttgctctaaaaatgaaatcttggaagaatttagc
actacccagttggctaaagtgcctgaaattgaggagtctgaagagttagaattgcttaat
aagccatacttaaagcagataaataatggggttggtgcagaaatagaagaggagcctaaa
aaagttagtaaagatgaagtcttggagcctttttacaagttatttaagcctagggaggag
tcattggaacaagaaagtagtgatacagaagatacagaacaggaggaggaagaagttcat
tcagttgaagcagaaagtaagaagattagtgtagagtattacgaaccgaaaccgggtgat
ttggtggtaggtgttgtggtttcaggcaatgagaataaacttgatgtgaatgttggtgct
gaccttttgggtacaatgttaactaaggatgttttgcctttgtatgacaaagagatgggt
tatttgttgtgtgatttggagaaggatgctgaggaattcttggtaagagggaaaatggga
attgtgagttatgatgaggcaatagagtgtggggaatcaatgtcagggaagcctgttgtg
gagcctgggactgttctttttgctgaggttctcggaagaactctcagtggtcggccgtta
ctgtcgacgagaaggctctttagacgcattgcttggcatcgagtgaggcagattaaacaa
ctaaatgaacctattgaggtggtgataacggagtggaacactggcggtcttcttaccaga
atagagggcttacgggcttttcttcctaaggctgatttaatgaacagagttaatagttat
accgagctgaaggagaatgtggggcgtcgaattaatgtgcttattaccagaataaacgaa
gagactaatgacttaatacttagtgagaaggaagcttggcaaatgttaaatctgcaagag
ggggtccttgtggaaggaacagtgaaaaagctttttccctttggcgcgcagataaggatt
ggtgaaacaaaccgaagtggcttgctacacatctcaaatgtcacccgaggcgagattact
tctatcaataacttgttagctgttgatgagaaggtgaaagttatggttgtgaagtcaatg
tttcctgacaaaatatctctcagtattgctgaacttgaaagcgagccaggattattttta
aaggacaaggagaaagtattcgctgaagcaaaagagatggcgaagaagtacagacagaac
ctacgaactgtttcagcaacaagaaaaccagaaccccttccaaccgatagactacctttc
gaagatgaagaaagtctgtatgctaattggaattggttcaagtttgagagggataccgta
taa
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