Nicotiana tomentosiformis: 104118361
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Entry
104118361 CDS
T05025
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
nto03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104118361
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104118361
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104118361
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104118361
03036 Chromosome and associated proteins [BR:
nto03036
]
104118361
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104118361
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104118361
SWI/SNF complex
104118361
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104118361
PBAF complex
104118361
SWI/SNF complex
104118361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
104118361
NCBI-ProteinID:
XP_009627881
LinkDB
All DBs
Position
4:76863541..76870421
Genome browser
AA seq
240 aa
AA seq
DB search
MKPQSAWGSLKNPVKFKIPTAENLVPIRLDIEIDGQRFRDAFSWNPNDPDSEVVVFARRT
VKDLKLPPGFITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTVIKDHYFWD
LNNFESDPEEFARTFCKDMEIEDPEVGPAIAISIREQLYEIAIQSVASARESRANKKRRV
TEHISASKTGVPALDLVKLFGIRSSVVRKRKDWDVYEPIVDLLSNEEVDALEAREEKVVR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcagtcggcatggggctcactaaagaacccggtgaagttcaagattccaacc
gcggagaatcttgttcctattcgtctggacattgaaattgatggtcaaagatttagagat
gcttttagttggaatccaaatgatcctgactcagaagtggtggttttcgcgagaagaact
gtgaaggatttgaagcttcctcctgggtttatcactcagattgctcaatccattcaatca
caattaacagaatttcggtcatatgaaggacaagatatgtacactggcgagagagttgtt
cccatcaagcttgatctccgagtaaatcatacagttatcaaggaccattatttctgggac
ttgaacaatttcgagagtgatcctgaagaatttgcacggactttttgtaaagatatggaa
attgaagacccagaagttggacctgcaattgccatatcaattcgagagcaactttatgag
attgcaattcaaagtgttgcatccgcaagagaaagtagggcaaataagaaacgcagagta
acggaacatatctcagccagtaagacaggtgtacctgcattggacctggtgaagttattt
ggcattagatcaagtgttgttcgaaaaaggaaggactgggatgtatatgaaccaattgtt
gatctcctttcaaatgaggaggtggatgccctcgaggctagagaagagaaggttgttcga
tga
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