Nicotiana tomentosiformis: 104118484
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Entry
104118484 CDS
T05025
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03440
Homologous recombination
nto03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104118484
03460 Fanconi anemia pathway
104118484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104118484
03036 Chromosome and associated proteins [BR:
nto03036
]
104118484
03400 DNA repair and recombination proteins [BR:
nto03400
]
104118484
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104118484
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104118484
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104118484
FA (Fanconi anemia) pathway
Downstream FA components
104118484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
104118484
NCBI-ProteinID:
XP_070052610
LinkDB
All DBs
Position
2:complement(194195613..194216146)
Genome browser
AA seq
1137 aa
AA seq
DB search
MPTWQLYSVAGNDFRLKISDEETKIVEPSLALAAPQQLQSMADLLRQGSSKLAGSSDASF
TANFPVFRTGSGKHVAVKQSSISRALSILNDKNNVVPDTGQGIGRENSFAFQAAVFQKGS
GKALDAPESFFPSGLEKQFNTSNSMFQTGSGKAVSISSAGLNRAKALLGLEENGDNETFQ
GSEKKNRCSDEHFGVRSSVPFVAVEGIANTWSTKASAASLSPFDVKFNSSVCAAEELVPD
FLHCADKPPPIKFHTAGGRSISVSSEALKRARSLLGDPELGCLVDEKDVVDPLFSFPKDQ
KSVDQSSVKELNSDTPVSLLSAAKGSGSLSLFTPPFGSTLYHKKSSVKTENLAPASNLMK
EFDAVAKESTSRPDHSIPPHGEAFNKNSAAVDLRENDIPSKPKLLQRPSRGPLVDISNSI
GAGSADRNQNFGQKRKPGRGSFVSPFKKPRIAKIVTPLKRNDSGASNGFSNSAPQLPSQK
GKVSVRYPFHVARLYMKEYLGDPPSFQSKLENLPDEVRRMNPDIAETHVFNDKSCSGCIG
VKSFWEMLSQSGASMQYVSKEWVTNHYKWIVWKLASYERCYSTKFSGKLLTICNVLEELK
YRYEREVNYGHRSAIKRILEGDVPPSSMMVLCVSKVYSICNSPVGPQFSLSNTTENGACA
KIELTDGWYSITAVLDILLSKKLAAGKLFVGQKLRIWGARFCGWTGPVSPLEASGTTSLL
LHINGTYRAHWASRLGLCKGGAIPLSFLSIKDGGGSVPLTLVGISRIYPVLYRERLSNGG
FVVRSERMEAKEMQSFNQRRCRVVEGITSESQRAKRDAYIGSDHESEEGARILKILERAA
EPELLMAEMSKEQLNAFASYQAKLEASRQSDLQKSLEKALQAAGLAERDVTPFMRVRVVG
LTSKSTPSKCCPQEGLITIWNPTEKQQSELAEGQAFAVTGLTPISSDSSTLYLQAKGSTA
KWQPLSPMAIEGFEPLFCPRRSVPLSKLGEVPMSREFDIAAVVVFVGHLYTEAHQSKQWV
FVADGSTSTLDSNDESETLMATSFTSPCIETDSFAPINSNLVGSVVSFCNLIKRARDNVN
NLWVAEATENSTYYLKFDHSHCSHLKEASASAERWAKISGSRLERLRGKVLSIISCR
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgtcgccgggaatgatttccgattgaaaatctccgat
gaagagactaaaatcgtagagccgagcttagccctagcagctcctcagcagctccaatcc
atggccgacctcttgcgtcaaggaagttcgaaattagcggggagtagtgatgcaagtttc
acggcgaattttccagtttttcgaactggatccgggaagcacgtggcagtgaagcagtct
tcgatatcaagagctctttcgatccttaatgataaaaacaatgtggtcccggacacagga
caagggattggaagagagaacagttttgcctttcaggcagctgtgttccagaaaggctca
gggaaagctcttgatgctccagaatcttttttcccttctggcttggagaaacaatttaac
acgtcgaactcaatgttccagacaggctctggtaaagcagttagtatatcttccgcaggt
cttaatagggccaaggcattgttgggcttggaagaaaatggtgacaatgaaacatttcaa
ggttctgaaaagaaaaatagatgttcagacgagcactttggggttcggagttcagttcct
ttcgtggcagtagaggggattgctaacacatggtctactaaagcttcagcagcttcattg
tctccatttgatgttaaatttaactcctcagtttgtgcagcggaggagttagtaccggat
tttctgcattgtgccgataaacctcctccgataaagtttcatactgctggtggtagatca
atatcagtttcttctgaggcattgaaacgtgcaaggagtctgcttggagatccagagctg
ggatgtcttgtagatgaaaaggatgtggttgatccattgttttcttttccaaaagaccaa
aaatctgttgatcagtcctccgttaaagaattaaactcagatactcctgtttccctctta
tcggcagcaaaaggcagtggctcgttaagcctttttacacccccatttggatcaactttg
taccataagaagtcttctgttaaaacagagaatctcgctccagcaagtaacttgatgaag
gagtttgatgctgtggcaaaagaaagcacgagtaggccggaccatagtattcctccacat
ggagaggcattcaacaagaactcagcagctgtcgacctaagagaaaatgatatcccttca
aaacctaaattgctacaaaggccttctaggggtcctttggtggatatctcaaatagcatt
ggagctggatctgcagatagaaaccaaaactttggtcagaagaggaaacctggaagggga
agttttgtttctccattcaagaagcctcgaattgccaaaattgtcacccctctcaaaaga
aacgattccggtgcttctaatggattctcaaattcagcaccacaattaccctctcaaaaa
ggaaaagtttcagttcgatatccattccacgttgcacgattgtatatgaaggagtatctt
ggggaccccccatcattccagagcaagctagagaatctgccagatgaagtgagaaggatg
aatccagatattgctgaaactcatgtgttcaatgataaatcttgctcaggttgcattgga
gtaaagtctttctgggagatgctgtctcaatcaggggcttctatgcaatatgtctctaaa
gagtgggttacaaatcactataagtggattgtttggaaacttgcatcttatgagaggtgt
tatagtaccaaattttctgggaagcttttgacaatctgcaatgtacttgaagaattaaag
tacagatatgaaagagaagtaaattatggtcatcgatctgcaattaagagaattctagaa
ggagacgtcccaccttcttctatgatggtgctctgcgtttccaaggtgtattcaatttgc
aactccccagttggacctcaattttctttgtctaacacgaccgaaaatggagcttgtgca
aaaattgaactgacagatgggtggtattcaattactgctgtcttagatatactattatcc
aagaagttggctgctggaaagctgtttgttggccaaaagcttaggatctggggagctcga
ttctgtggctggacaggtcctgtttcaccacttgaggcatcaggaacgactagtttgcta
ctgcatataaatgggacatatagagctcattgggcatctcgtttggggttatgtaaaggt
ggtgccattccattatcatttttatcaatcaaggatggtggaggttctgttccacttaca
ttggtcggaatttcaaggatatatcctgttctctacagggaaaggttaagtaatgggggt
ttcgttgtaagatctgaaaggatggaagctaaagagatgcagtcttttaatcaaagacgc
tgtagagttgtggagggaataacctcagaatctcaaagggcaaagagagatgcgtacatt
ggaagtgaccatgaaagtgaagaaggggcaagaattttgaagatactagagagagctgca
gaaccagaacttctgatggcagagatgtctaaagagcagttgaatgcatttgcatcctat
caagcaaagttggaggcatcgaggcagtctgacctgcagaaatctcttgaaaaagctttg
caagctgctggacttgctgaaagagacgtcactccttttatgcgagttagagttgttgga
ttgactagcaaaagtactccatcgaagtgctgcccacaggaaggcttaattacaatttgg
aatccaactgagaagcagcaatccgagcttgcagagggtcaagcttttgctgttacaggg
cttacaccgataagctcagactctagcaccctttatttgcaagcaaaagggtccacagcc
aaatggcagcctttgtctcctatggcaattgagggttttgagccccttttttgtcctcgc
cgatcagttccattgagtaaattgggtgaagttcctatgtccagggagtttgatatcgct
gcagtggttgtttttgtggggcacctgtatacagaagctcatcaaagtaagcagtgggta
tttgtagctgatggatccacatctacgttggattccaatgatgaatcagaaaccttgatg
gccactagcttcacctcaccatgcatagaaactgattcatttgcaccaataaactctaac
cttgtagggtctgtggtttccttttgcaatctcatcaagagagcacgagataatgttaat
aacctctgggtagctgaagcaacagaaaattcgacctattatttaaaatttgatcattca
cattgttctcatctgaaagaagccagcgcttctgctgaaagatgggcaaagatatctggt
tcgagacttgaaaggcttagggggaaagttctatctataattagctgccgctga
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