Nicotiana tomentosiformis: 104118867
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Entry
104118867 CDS
T05025
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104118867
03036 Chromosome and associated proteins [BR:
nto03036
]
104118867
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104118867
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
Helicases
104118867
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104118867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
FlpD
Motif
Other DBs
NCBI-GeneID:
104118867
NCBI-ProteinID:
XP_009628541
LinkDB
All DBs
Position
3:76322987..76327656
Genome browser
AA seq
691 aa
AA seq
DB search
MPALVVSETMGSEESQELKKKMKKSEKGSSADTLKKSKKTKIDSGSDSEELKKSKKKDKK
RKVLNLDDDDEDGSSEIVEPSNLIGDDKKKKKKKAKLVENDDDEEKEEEKEKEKEKEEDP
NALSNFRISVPLREALIAKGIQALFPIQAMTFDTVFDGNDLVGRARTGQGKTLAFVLPIL
ESLTNGPTKASRKTGYGRAPSVLVLLPTRELALQVFADFEVYGRAVGLTSCCLYGNSPMG
QQQVQLKRGVDIVVGTPGRVKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGK
VEDASQVQTLLFSATLPSWVKHISSKFLKPDKKTADLVGDEKMKASKNVRHIIIPCSSSA
RTRLIPDIIRCYSSGGRTIIFTETRGYASELAGLLPGAHALHGEIQQSQREVTLSGFRSG
KFLTLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKKS
NISRIERESGVKFEHLSAPQPADVAKAAGKEAAEAVAEISDSVIPAFKAAAEELLHTSEL
SPAELLAKALAKAAGYSEIKTRSLLSSMENCVTLLLECGRPIFAPSFAYNVLRRFLPEDK
VESIKGLTLTADGKGAVFDVSADDLDMFLAGKNTQGVNLEVVKELPRLQEKDQARGGRFG
GGRGGFSDRRGGGRFSGGRGGRGRGNFGRRW
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgttgtaagtgaaacaatggggtctgaagagtcgcaggagctgaagaag
aagatgaaaaagagcgaaaaaggatcatccgccgacacccttaaaaagtcgaaaaagacc
aagattgattctgggtctgattcagaagagcttaagaagagtaagaagaaagataagaag
cgaaaagtcttaaacttggatgatgatgatgaggatggaagttcggagatagtggagccg
agtaatttgattggggatgacaagaagaaaaagaagaaaaaggctaaattggtggagaat
gatgatgatgaggagaaagaggaagagaaagagaaagagaaagagaaagaggaggatcct
aatgctttgtctaattttaggatttcggtgcctttaagagaggctttgattgccaagggg
attcaagcgctctttcctattcaagctatgacttttgatactgtctttgatgggaatgac
ttagttggtcgagctcgcactggtcagggtaaaacattggcctttgtgttgcccatattg
gagtccctgacaaatggtcctactaaagcatctcggaaaacagggtatgggagagctcct
agtgttttggtgcttttacctactagggaattggcacttcaggtgtttgctgactttgaa
gtttatggtcgggctgtggggctcacttcatgttgtttgtatggaaattctcctatggga
caacaacaagttcagttgaaaagaggagttgatattgttgtgggtactcctggaagagtt
aaggaccacattgaaagaggaaatattgatttcaggtctctaaagttccgtgttcttgat
gaagttgatgaaatgctgaaaattggttttgttgatgatgtggaatttatattaggcaag
gttgaagatgcaagccaagttcaaacacttcttttcagtgccactttgccaagctgggtg
aagcatatatcttctaagtttctcaaacctgataagaaaacagctgatcttgttggtgat
gagaaaatgaaggccagtaagaatgtgagacatattattataccatgctctagttcagcc
agaactcggctgattcctgatattattcgctgctacagcagtggtggccgcactattatt
ttcactgaaacaaggggttatgcttcggagctagctggcttattgccgggagcacatgct
ttgcatggagagattcaacagtcccagcgtgaggttacactatctggattcagatcagga
aaattcctgacattagtggccacaaatgtagcagcccgtggattggatattgacgacgtt
caattaattattcagtgtgagcctccacgcgatgtcgaagcatatattcatcgatctgga
aggacaggacgggcaggaaatactggtgttgctgtaatgctttatgatcctaagaagtcc
aacatttctaggattgaaagagaatctggtgtgaagttcgagcatctatctgctccacag
ccagctgatgttgctaaagcggctgggaaagaagcagcagaagcagttgctgaaatttct
gatagtgtaatacctgctttcaaggctgccgcggaggaacttctacacacctctgaacta
tcaccagcagaattgcttgccaaggcacttgccaaggcagctggttactctgagatcaag
actcggtcgcttctttcttccatggagaactgtgttactctacttcttgagtgtgggagg
cccatatttgcaccttcatttgcatataatgttttgcggaggttcctacctgaggataag
gttgaatcaatcaaaggtcttactttgacagctgatgggaagggcgctgtttttgatgta
tctgctgatgacctggatatgtttctagcagggaagaatacccaaggtgtaaacttagag
gtagtaaaagaactgcctcggttgcaagagaaagaccaggcaagaggtggaagatttggt
ggtggtcgtggtggcttctctgacaggagaggtggtggtcgcttttccggaggcagaggt
ggaagaggtcgcggaaacttcggccgtagatggtga
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