Nicotiana tomentosiformis: 104119118
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Entry
104119118 CDS
T05025
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X3
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104119118
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104119118
Surveillance factors
Other surveillance factors
104119118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
104119118
NCBI-ProteinID:
XP_009628833
LinkDB
All DBs
Position
11:complement(90583258..90592258)
Genome browser
AA seq
1563 aa
AA seq
DB search
MAKSKFDLPDDLLSSKGNYDDKSFLVSIDDSKDQAAVDSNIPLSPQWLYVKPSDSKMEMR
APSSLSLGSSADSNQKDAWRSDVPDEKTDWRRPAAETESGRRWREEERETGLLGRRDRRK
PDRRAENAPAKETTDARALPASDRWHDVNNRNLGHDTRRDTKWSSRWGPEDKEKEARSEK
RIDVDKDEVHNEVQTFGANRTVSERESDTRDKWRPRHRLEGSSGAPGSYRAAPGFGVEKG
RVEGSNVGFTMGRGRSSVAILKPSGCAIGAAQFDNSVPGKPSISTHTYCYPRGRILDIYR
RQKLEQSFCSLPVNMEEAPPITQLSITEPLAFVVPDSEEEAILNDIWQGKITGSGVMYNS
YRKGRSMDNVTEIGDAEFADGKQGILSTDIIEETGDRFPKTLKDVEEANVNSLFCGNDVN
VILGEGDANHEVQKEKVSEDIARDDILLANKRADNIGSLKDSSSSQLDHSEIKLPDYAAT
RHPLFENIEQNVAFDVSAKFPDNSNSIYIMPSDINNSRHSGIENQLERDIPPEELSLYYC
DPQGEIQGPFLGVDIISWFEQGFFGTDLLVRVEGAPEDSPFYELGDVMPHLKFGHMYASN
TDLPKVDQPAVLEGKLESGLRSSVSELVSSAPLDGLSWPSSDFDGLAAQRFQSKVPDLSY
SQSEDFNEFVGQNEETLFPGRPVSRGNPIGKTLRAPTDLSNTNHPIPSEFMEPRAPSQKD
KMHPLGLLWSELEGTSRRNDQIPNVPFSGGGQDQILNPVAARVTPFGSRTESTSTAEMWD
AYRRNAPSDPNLYQDAMDAHRLSHMDREPNHFELAEKLLSQQLQQHPHSLLSAHNSHLNE
AMLERGASHNSVHHPQVASQIEKDLERVMALQLQHQRQLQLQQHQQMQQQQQFHQQQMLL
KEQQQSHARQLLLEQLLQSQMSDTNRAQSRLDATRPNNALEQVLMKQQILTELQRSHLHP
RHTEPSLEHLIQAKLGQMPHQGHQNDLMELLSRAKHGHMHPLAHQILQQEQLHSRQLPVG
LRQQLEMEEDRHSGSVWPVDEAGQFLRIPTDAHRSNSGFGPLDFYQQQQIPSPEEHLSHL
ERNLSVQDRFAHGLYDSGLLPFERSMSLPVGGPGLKMDVANPLVQQQSLEMQDLNSRMHS
GAQMAGFSNDVYSQSPHQHLVPNQFHALHPDTIEKHWSKSNGQVPMDWMESRMKQLNLNS
EREKKDFDIKQVSEDPSMWMSAGMNDDSSKRLLMELLHPKYGQQSTEQAEMPNGISHEIL
SGHVLGTNSANHSINPLLNQDMSQNQTFPVGSFGSTSGLLPQRDLVDERSRVLAGGERLP
RKSHSGALAEANPLFSSISDAFQRHSEVRENAVEQAGLTAITGDIPVNILRRPTSLGTGG
GNVGLYDDKIGTGDSLPEEPAKERVSAMTSKRPENILLKRPPVSRVSSNLEGFSELTSDS
LVRGKNPSNAMVSEGGKVEVGGNTANQAPDIVTPGKKDVRFRRTASCSDSDVSETSFSDM
VKSSAKKPTAQEAHASESLDGTQGARTSSKKKGKKGRQIDPALLGFKVTSNRIMMGEIQR
IED
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagcaagttcgatctccctgacgatctcctttcttccaaaggtaattatgat
gacaagtcattcttggtgtcgattgacgattcaaaagatcaagcagcggtggacagtaac
attcctttgtctccccagtggctttatgtgaaaccaagtgactctaagatggaaatgcgt
gcaccaagttctctctcacttggaagttctgctgattcaaatcagaaggacgcttggcgt
tcagatgtgcctgatgaaaaaacagattggagaagacccgcagcagagacagagagtggt
cgccgatggcgtgaagaagagagggaaactggcttgcttggcagaagagatcgtaggaaa
ccagatcgccgtgctgaaaatgctcctgccaaagaaaccacagacgctagagctttacct
gcttctgacagatggcacgatgttaataatcgcaatttgggacatgacacaagacgtgat
accaagtggtcctctaggtggggtcctgaagacaaagaaaaggaagcacggagtgagaag
aggatagatgtagataaggacgaagttcataatgaggtacaaacatttggtgctaaccgt
actgtgtccgagcgggagtcggatactcgagataagtggagaccacggcatagattggag
ggtagctctggtgctcctggttcctatcgtgctgctccaggatttggagtggagaaagga
agagtcgaggggtcaaatgtgggatttaccatggggcgtgggagatctagtgtggctatt
ttaaaaccttctgggtgtgcaattggggctgcacaatttgacaattctgtccctggaaaa
ccaagcatctcaactcacacatattgttatccgcgggggaggattttggatatataccgc
aggcaaaagctggagcaatctttttgtagcttgcctgtaaatatggaagaagcaccccct
atcactcaactaagtatcaccgaaccattagcttttgttgttcctgattctgaggaggag
gctatccttaatgatatatggcaaggtaaaattactggtagtggtgtgatgtacaattct
tacagaaagggccgatcaatggataatgttacagaaataggggatgcagagtttgccgat
ggaaaacagggcattctctctacagacatcattgaggagacaggggataggtttccaaaa
acattaaaagatgttgaagaggcaaatgtcaatagccttttctgtggaaatgatgtcaat
gtcatattgggtgaaggggatgcaaatcatgaagtacaaaaagagaaagtctctgaagat
attgctagggatgacattttgttggccaataagagagctgacaacataggcagcttgaaa
gatagtagtagttctcaacttgatcattctgaaatcaagttacctgattatgcagcaact
aggcacccactctttgagaatattgaacagaatgttgcttttgatgtcagtgcaaagttt
cccgataattcaaattctatatatatcatgccctctgatatcaacaactcaagacacagt
ggtattgaaaaccaattagagagggatatcccacctgaggaattgagtttgtattattgt
gatcctcagggagaaattcagggaccatttcttggagttgacatcatctcatggtttgag
caaggattttttggaactgacttactggttcgcgtggaaggtgctcctgaggattcacct
ttctacgaattgggtgacgtaatgccgcatttaaaatttggacatatgtatgccagtaat
acggatctccctaaggttgatcaacctgctgtattagaggggaagttggagtctggttta
cgcagttctgttagtgagcttgtttcttcagctccccttgatggattaagctggccatca
tctgattttgatggtcttgctgcacagcgttttcagtcaaaagtacctgatctgtcatat
tctcaaagtgaagactttaatgaatttgttggtcaaaatgaagaaactttgtttccaggt
agacccgtaagtagaggcaatcctattggaaaaactttgagggcccccactgatctttca
aataccaatcatcccattcctagtgaatttatggagcccagggctccgagtcagaaagat
aaaatgcacccacttggtttgttatggtccgagctcgaaggcacttcaagaaggaatgat
caaattccaaatgttccttttagcggaggtggtcaggatcaaattctaaaccctgtagct
gcaagggttaccccatttggttcaaggaccgagtcaacctctactgcagaaatgtgggat
gcttatagaagaaatgctccttctgacccaaacttatatcaagatgccatggatgctcac
cgcttgtcgcacatggaccgggaaccaaatcattttgaattggcagaaaagctgctctct
cagcaacttcaacaacatccacatagtttactgtctgctcataacagccacttgaatgaa
gcaatgctggaaagaggggcaagccataattcagtacaccacccacaggtggccagtcaa
attgagaaggatctggaacgtgttatggcccttcagctgcagcaccagagacagctgcag
cttcaacaacatcagcaaatgcagcaacagcaacagttccatcaacagcagatgctactg
aaagaacaacaacagtctcatgctagacagttgcttcttgaacaattgttgcagagtcaa
atgtctgatactaaccgtgcacagtcacgtcttgatgctacaaggcctaacaatgccctg
gaacaggttttgatgaagcagcaaattctaactgaactacaacgctctcaccttcatcca
agacatactgaaccatcacttgagcatctcattcaggctaaacttggtcaaatgccacat
caagggcatcaaaatgatttaatggagctcctatcacgagcaaagcatggacatatgcac
cctttggctcatcaaattcttcagcaagaacaattgcacagcaggcagttgcctgttgga
ttaaggcagcaattggaaatggaggaagacaggcattctggttctgtatggcctgtagat
gaagctggtcagtttctccgaatcccaaccgatgctcatcgatccaactctggatttgga
ccattagatttttaccaacagcaacagataccatctcccgaagaacatttaagtcacctt
gaacggaatttgtctgtacaagatagattcgcacatggtctctatgactctggattgttg
ccgtttgaacgatcaatgtcattaccagttggtggtcctggattaaaaatggatgttgca
aatccacttgtgcagcaacaaagtttagaaatgcaagatctgaattcaagaatgcattca
ggtgctcagatggctgggttctcaaatgatgtctactcgcaatctcctcaccagcatttg
gttccgaaccagtttcatgctttgcatccagataccattgaaaaacattggtctaaaagc
aatggtcaggtacctatggattggatggaatcccgaatgaagcaactgaatctcaatagt
gagagggaaaaaaaggattttgatatcaaacaggtttctgaagatcctagtatgtggatg
tcagctggtatgaatgatgacagttcaaagcgattgcttatggaactgcttcatcctaaa
tatggccagcagtcaactgagcaagcagaaatgcccaatggaatttcacatgagatactg
tctggtcatgttcttgggacaaattcagcaaaccactcaattaatcccctattgaatcag
gatatgagtcaaaaccaaaccttccctgtagggtcattcggttctacttcaggtctgcta
ccacagagagatcttgtggatgagaggtcccgtgttcttgctggtggtgaaagattgccc
cgcaaatctcattctggagcgttggctgaagctaatcctctcttttccagcatcagtgat
gccttccagaggcactcagaggttcgagaaaatgctgtcgagcaagctggtctgacggct
ataacaggggacatcccagtaaacattctccgcaggcctacttcacttgggactggaggt
ggtaatgttggcttgtatgatgacaagattggtacaggtgactctttgccagaggaacct
gctaaggaacgggtgtctgcaatgacatcaaaaaggccagaaaacattttgctgaagcgt
ccacctgtctcgcgagtgtcatctaacctggaagggttttctgaattgacttctgattca
cttgttagagggaaaaatccttcgaatgccatggtttctgaaggggggaaagtagaagtt
ggaggtaacacagcaaatcaagcccctgacatcgtgacacctggaaagaaagatgtgcgc
tttcggcgaactgcctcatgtagtgattctgatgtttcagagacatcattcagtgacatg
gttaagagtagtgcgaagaagccaacagcccaggaggctcatgcttcagaatcattagat
ggaacacagggtgcccgtaccagcagcaagaaaaaagggaagaaaggaagacaaatcgat
ccagctcttcttggattcaaggtcacaagcaatcgcatcatgatgggtgagatacagcgg
atagaagattag
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