Nicotiana tomentosiformis: 104119129
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Entry
104119129 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03030
DNA replication
nto03410
Base excision repair
nto03420
Nucleotide excision repair
nto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104119129
03410 Base excision repair
104119129
03420 Nucleotide excision repair
104119129
03430 Mismatch repair
104119129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104119129
03036 Chromosome and associated proteins [BR:
nto03036
]
104119129
03400 DNA repair and recombination proteins [BR:
nto03400
]
104119129
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104119129
DNA Replication Termination Factors
ELG1-RFC complex
104119129
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104119129
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104119129
Check point factors
HRAD17(Rad24)-RFC complex
104119129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
TIP49
Motif
Other DBs
NCBI-GeneID:
104119129
NCBI-ProteinID:
XP_070049293
LinkDB
All DBs
Position
2:42485965..42489430
Genome browser
AA seq
766 aa
AA seq
DB search
MEGASTYNRALQLKISSTMRQRRSGYEPSDTETDWTLDSPHQEANANNEKEIHVEEPECE
DPNVALQKAKDNKFLNVSRRTNVPSPARRRTTKSPYKPRRDTDDDDDVHSPAKALPRSVS
TFSRRPDLYSRRNVSPFQKSEYRRHTSPYKYAGEDHHLDKDEFADSNRKQNNVHSRLGEK
SNYNRRYASAPRPDRQHRFDASKERRKADKTPSQLPIRSLSRKERETPSKHGPTGGELNE
MIAKAKISGSSTDANHMFESTETIAPGDIFFSQDCAALTMQQITENKSNKKTQVLTDRNV
VLSVKTPANFNNQSSRRNLSSNTMTRPTMSASSSVSRQSSNMSEASGRTTASMKRFTANR
QKKQSEAWFSCLNKGSCRTSRRESPERGQPIDEALVIAKASVVESLKPFWADRYQLASLE
GFTCHKQEALLLKDLVSSNETFPQILFKGPSGSGKRTLAIALLREIYGDAICNISHDLRY
FQIKETRPVQVVVPVSSSPHHIELNVQLEPNARYAIMAFVKQISTEYALTPEISRMNMKA
DYKVIVLYNVDKAAENIQHLIKWIMDCYSDACKLILCCEDDVSILDSVKSRCKVVELAAP
VTHEIMEVLIQIARKEDFELPMGFAAKIAAKSKQNLRRAIMALEACKAHNYPFAEDQPIS
IGWEEIIIELAAEILAHPTPTRLFSVRGKFQKLLVEFVHPKLILLKLVEEFLKRVDAGIR
REIYYWHAYYEKRLPLGTVALLKLEEFVAKFMSIYRKTLGSRQQFQ
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcttcaacatataacagagctctacaactaaaaatctcgtcgactatgagg
caaagaagaagtggttacgagccatcagatacggagacagattggacgttggacagtcca
caccaggaagcaaatgcaaacaatgaaaaagaaatacatgttgaagaacctgaatgcgaa
gatccaaatgtagcattgcagaaagcaaaggacaataagtttttgaatgtaagccggagg
actaatgttccaagtcctgctcgaaggagaactactaagtctccttataagcctcgtaga
gataccgatgatgatgatgatgttcattctcctgcaaaagctttaccaagaagtgttagc
acattttcgcgcaggcctgatttatattctcgtagaaatgttagtccttttcaaaaatct
gagtaccgtagacatacatctccatataaatatgcgggagaggaccatcatctagataag
gatgaatttgctgattcaaatagaaagcaaaacaatgttcacagtagactcggtgagaaa
tcaaattataatcgcaggtatgcttctgctcctagacctgacagacaacataggtttgat
gcttccaaggagcgaaggaaagcagataagacgccgtcccaattgccaattaggagcttg
tcgcggaaagagagggaaactccgagtaaacatggacctacaggaggtgaacttaatgaa
atgattgccaaagcaaagatttctggaagcagtacagacgctaatcatatgtttgaaagc
acagaaaccattgcacctggtgatattttcttttctcaggattgtgcagccttgactatg
cagcagattactgaaaacaaatccaataaaaagactcaggtactgactgataggaatgtt
gtactatctgtgaaaacacctgccaattttaataatcagagtagcagaaggaatttatct
agtaatactatgactcgaccaactatgagcgcgagctcttcagtaagcaggcagagcagt
aatatgagtgaggctagtggaaggacaactgcaagtatgaaaagattcaccgcgaacagg
caaaagaagcaatcagaagcatggttttcttgtctcaataagggatcatgtagaacctca
agaagagaatctccagaaagagggcagccgattgatgaagctttagttattgccaaggca
tctgtagttgaaagcctgaaacccttctgggctgataggtatcaacttgcttcactagaa
ggattcacttgccacaagcaagaagctttactacttaaagacctggtttcttcaaatgaa
acctttccacagatcttattcaagggaccttctggctctgggaagagaacgctcgcgatt
gctcttcttcgtgaaatatatggagatgcaatctgcaatatatcccatgatctgagatac
ttccaaattaaggaaacaaggccagtgcaagttgttgtaccagtaagctcaagtcctcac
catatagagctcaacgttcaattagaacctaatgctagatatgcaataatggctttcgtt
aagcaaataagcaccgagtatgcactgacccctgaaatcagcagaatgaatatgaaggct
gattacaaagtaatagttctttataatgtggacaaagctgcggagaacatacagcacttg
ataaaatggataatggactgctattcagatgcttgcaaactcattctctgctgtgaagat
gatgtatccatacttgactcagtgaaaagccgctgcaaagttgttgaacttgcagctcct
gtaactcatgaaatcatggaagttcttattcagatagcaagaaaggaagattttgaacta
ccaatgggctttgcggctaagatagccgccaaatcaaagcaaaacctgaggagagcaatt
atggctcttgaagcctgcaaagcacacaactatccctttgccgaagaccaaccaatttca
ataggatgggaggagatcataatagaacttgcagcagagattctagctcatcccacccca
acaaggttattctctgttcgggggaagtttcaaaaacttttggtggagtttgtgcatcca
aaacttattctcctgaaactagttgaagaattccttaagagggtagatgctggtataaga
agggaaatttattattggcatgcttattatgagaagagactccctcttggaacagttgct
ttgttaaaattagaagaatttgtggcaaaatttatgagcatatacaggaaaactttgggc
agccgtcaacagtttcaataa
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integrated database retrieval system
