Nicotiana tomentosiformis: 104119388
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Entry
104119388 CDS
T05025
Name
(RefSeq) putative RING-H2 finger protein ATL37
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104119388
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104119388
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104119388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_1
Rtf2
zf-RING_6
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
104119388
NCBI-ProteinID:
XP_009629173
LinkDB
All DBs
Position
12:90297191..90298730
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AA seq
403 aa
AA seq
DB search
MKHKRNILCFLFCLFCFMSETGTVSATRPLNSNVEISPTLAILLACLVLFLLAVIFIYIR
RMSPDSFDESMGFYFFRQRPVSRGIEPNIIETLPVFVYSDVKALKIGKSILECAVCLNEF
EDEDTLRLLPNCCHVFHSECIDAWLAFRTTCPVCRANLKTKPVGKLQESIQETDDVESQN
VSSDASHPAPEEVINQSSQTPPVHNHTPNSSSKARSKTPDFRHLAPKSTPRRPKIFGMFS
RSHSTGHSLIQPGENCERFTLRLPDDVRKRLIDLSLSRAYNGAVAFSPARNSTKGYRFQP
EEGRLSLSRASNGAVAFSPARSSTKGYRIEPADGRLSKLRFLPTPPMFSRSGSSKEEKGE
KQPKSLLKSVKSVKSPLSLFCGTEKDDTGERSFTYLRSSSTSS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataagagaaatatactctgtttcctcttttgcttattttgtttcatgtcagaa
actggcacagtttcagccacacgcccgttgaactcaaatgtcgaaatcagtccaacgtta
gcgatattactcgcttgtctcgtattattcttgttggccgttatcttcatatatatacgt
cgtatgagccctgattcctttgacgaatcaatgggtttttacttctttcggcagcgacca
gtttcccgtggaatcgagcctaatatcatcgaaactttgccggtattcgtgtactccgat
gtcaaagccctaaagataggcaaatctatcctagaatgtgctgtttgcctaaacgagttc
gaagatgaagatacgctccgccttcttcctaattgttgccacgtgttccattctgaatgt
attgatgcttggcttgcctttcgtaccacttgcccagtttgccgtgcaaatctcaaaaca
aaacccgtgggtaaacttcaagaatcaattcaagaaacagatgacgttgagtctcagaat
gtcagctcggatgcatcacatccagcaccagaagaagtaataaaccagtcttctcaaacg
ccgcccgttcataatcatactccaaatagtagcagtaaggcgagaagtaagacacctgat
tttcggcaccttgcaccaaaatcaacaccgagaaggccaaagatttttgggatgttcagt
cgatctcactcgacgggtcactcgttgattcaacctggtgagaattgcgagaggtttact
ctaaggttacctgatgatgtacgtaaaagattgatagacttaagcttgagtagagcctac
aatggcgccgtagctttttctccagcgagaaattcaactaaggggtaccggttccaaccg
gaggagggccggttaagcttgagtagggcatccaatggcgccgtagccttttctccagcg
agaagttcaactaaggggtaccggatcgaaccggcggatggtcggttaagcaagctccgg
tttctaccgacaccgcctatgttctctagatccggttcgtcgaaagaggagaagggtgag
aaacagccgaagagtctgctgaagtccgttaagtcagttaagtcgccgttaagtttgttt
tgcgggacggaaaaggacgatacaggagaaagatcttttacttatttaagatcaagtagt
acttcaagttag
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