Nicotiana tomentosiformis: 104119579
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Entry
104119579 CDS
T05025
Name
(RefSeq) protein transport protein SEC24 A-like isoform X3
KO
K14007
protein transport protein SEC24
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104119579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104119579
Membrane trafficking [BR:
nto04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104119579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
104119579
NCBI-ProteinID:
XP_009629419
LinkDB
All DBs
Position
2:143464344..143490894
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AA seq
1058 aa
AA seq
DB search
MGTEYPNGPAIPSRPVSPFSVPQSSTPFQSSGPVVGSEASAFRHASPSSSQITSLSSASG
AMVGTEASAFRTMPSGMPNDAARPPPTSPSPYGPPAAGPYQRFPAPQFSSTAGVPPPRSS
LAGQPVLQPPVRPVSGPFSTSHVSLNPQIQPPHVPMGFPPQSASMVQPGPVVPRSPVDSQ
FSAARATMHPSSPPAGPAYPAARPGFQSAFPGYISYQNTAGAQVQPRQSLAFPSQQGGYV
PTMPATSSPYLAQQGGYAAPPSVASQLGNSREQMQHPGSTPPTAVMQGLEEDFSSFSIGS
VPGSFDPGLDSKVLPRPLEGDLERNTLSEMYPMNCSLRYLRLTTSGIPNSQSLASRWHLT
LGAVVSPLAEAPNGEEVPVVNFARTGIIRCKRCRIYVNPYVTFTDSGRKWRCNLCALLND
VPGEYFAYLDASGRRIDLDQRPELTKGSVEFIAPTDYMVRPPMPPLYFFLIDVSVSAVKS
GMLEVVSQTIKSCLDNLPGFPRTQIGFITYDSTLHFYNMKSSLTQPQMIVMSDLDDVFIP
LPDDLLVNLSESRTVVDAFLDSLPSMFQENVNVESAFGPALKAAFMVMSQLGGKLLIFQH
TLPSLGVGRLRLRGDDLRVYGTDKEHTLRTPEDPFYKQMAADFTKYQVAVNVYGFSDKYT
DIATLGTLAKYTGGQVYYYPGFQAAVHKDKLRHELARDLTRETAWESVMRIRCGKGVRST
TYHGNFMLRSTDLMALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTSSSGERRIRV
HTTAAPVVSDLGEMYRLADTGAIVSLFTRLAIEKALASKLEEARSFIQLRIVKALREYRD
LHAVQHRLGGRMIYPESLKCLPLYGLALCKSIAFRDGHADARLDERCTAGYTMMALPVKT
LLKLLYSQLIRVDEYLLKKPSLAEDSIDIWNGLPLAAGSLDPQGLYLYDDGFRFVLWFGR
MLSPDILNNLLGENFAADFSKVCLRELDNEMSRKLLGLLNKYRESDRSYYQLSYLVRQGE
QPREGYFLLANLIEDAVAGANGYLDWIMQLHRQVQQNA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgaatatcctaatggtcctgccattccctcgaggcctgtttctccctttagt
gttccacaaagttcaacaccctttcaatcatctggtccagtggttggatccgaagcttct
gcatttcggcatgcttctcctagttcttcccagattacgtctctttcctctgcatctggc
gccatggttggaactgaggcctctgcttttagaacaatgccatcaggtatgcctaatgat
gcagctaggccacctccaacatctccatctccatatggaccaccagctgctgggccttac
caacgctttccagcaccacagttttcttctacagctggggtacctccaccacgctcttca
cttgcaggccaacctgttttacaaccaccagttagacccgtttcaggtcccttctcaaca
tctcatgtttcccttaatccccaaatccaacctcctcatgttcctatgggattcccccct
caaagtgcgagcatggtgcaacccggtccagttgttcctcggtcacccgtagattcccag
ttttctgctgccagggcgaccatgcatccatcttcaccaccagcaggtccagcttatcct
gctgccagacccgggtttcaatctgcttttccagggtatataagttatcaaaatacagcg
ggtgcacaggttcaaccaagacaatctttagcctttccttctcagcaaggtggttatgtt
ccgacaatgccagcaacatctagcccctatcttgcccaacaaggaggctatgcagctcca
ccatcagtagcatctcaactgggtaactcaagggaacaaatgcagcatcccgggtctaca
cctcctacggcagttatgcagggtttagaagaagatttcagttccttctctattgggtct
gttccaggatcatttgatccggggcttgattctaaagttctaccaaggccattggaaggt
gacctggaacggaacactttgtccgagatgtatccgatgaactgtagtttaagatatttg
aggctaacgactagtggtataccaaattctcagtccttggcttcaaggtggcacttaact
cttggagcagttgtttctcctcttgctgaagctcctaatggggaagaagttccagtagtt
aattttgcccgaactggcatcatacggtgtaaaaggtgccggatttatgtaaatccctat
gtgacgtttacagacagtggaagaaagtggcgatgtaacttatgtgcattgcttaatgat
gttcctggcgaatattttgcctatttggatgccagtggcagaagaatcgatttggatcaa
aggcctgaacttaccaaggggagcgtggagttcattgctcccactgattacatggtccgg
cctccaatgcctccactttactttttcctcatcgatgtatctgtatctgctgtgaagagt
ggaatgctcgaggttgtatcacaaacgatcaagagttgtttggacaatttgcctggcttt
cccagaacacagatcgggtttataacttatgacagtacattacacttttataatatgaag
tcatccttgactcagccacaaatgatcgtcatgtcagatctggacgatgtatttattccg
ttgccagatgatctccttgtcaatttgtcggaatcaagaactgtggtagatgcattttta
gatagcttgccttcaatgttccaggagaatgtaaatgtggaatcagcttttggtccagct
cttaaagcagccttcatggttatgagtcaacttggtggtaaattgctgatctttcagcac
actcttccatcattaggtgttggccgcttaagactgcgaggagatgatcttcgtgtttat
ggaactgacaaggagcatacattgagaactccagaagatcctttctataaacagatggct
gccgatttcaccaagtatcaagtagcagttaatgtatacggtttcagcgacaaatatact
gatatagctacattagggactcttgcgaagtatacaggtggtcaggtatattactatcca
ggtttccaagctgctgttcacaaagataaattacgtcatgagttagccagagatcttaca
agggagactgcttgggagtctgtcatgcgtataagatgtggaaaaggtgttcgttccact
acgtatcatgggaacttcatgctgagatctactgatctaatggcacttccagctgttgac
tgtgataaagcatatgcgatgcagttatcgcttgaggagacactgcttacatcccagacg
gtctatttccaagtagccctattatacacttcatcttctggagaaaggcgcattagggtg
cacacaacagcagcacctgtggtctcagacttaggagaaatgtatcgcctggctgatacg
ggtgccattgtttctctttttacgaggctggctattgagaaagctctggcctctaaattg
gaggaggctcgaagttttattcaactcaggattgtgaaagctcttagagaatatcgagat
ctccatgctgtccaacaccgcctaggaggaaggatgatatatccagaatctttaaagtgc
ttgcccttgtatggattagcattatgtaaatcgatagccttccgtgatgggcatgctgat
gctcggcttgatgaacgctgcactgctggatataccatgatggctttgcctgttaaaaca
ttgttgaaacttctttattctcagttgattcgtgtagatgaataccttctaaagaaacca
tctttggctgaggattctatagacatatggaatggacttccacttgctgcagggagttta
gatcctcaaggtctctatctctatgatgatggttttcggtttgtcttgtggttcggtagg
atgctttcacctgatatacttaacaatttgcttggggaaaactttgctgctgacttctct
aaggtttgtcttcgagaactagataatgaaatgtcaagaaaattgttgggcttgcttaac
aagtacagggaaagtgacagatcatattatcaattaagttatcttgtgagacaaggtgaa
cagcctagagaaggatacttcctgcttgcaaatctaattgaggatgcagttgctggtgca
aatggttatcttgattggattatgcaacttcaccggcaagtccagcaaaatgcataa
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