KEGG   Nicotiana tomentosiformis: 104119602
Entry
104119602         CDS       T05025                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03030  DNA replication
nto03410  Base excision repair
nto03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104119602
   03410 Base excision repair
    104119602
   03420 Nucleotide excision repair
    104119602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nto03032]
    104119602
   03400 DNA repair and recombination proteins [BR:nto03400]
    104119602
Enzymes [BR:nto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104119602
DNA replication proteins [BR:nto03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    104119602
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      104119602
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 104119602
NCBI-ProteinID: XP_009629449
LinkDB
Position
11:103370061..103417860
AA seq 2219 aa
MNGGGDNRRQDWRDTTRISKKQKLILNSEEQLESKLGFDVFTEGDKRLGWLLTLASSSWE
DQETRKVYSCVDLYFVCQDGSTFKAKYKFRPYFYVATKDKMEMDVEAYLRRRYESQIADI
EILEKEDLDLKNHLSGLHRSYLKISFDTVQQLMHVKRDLTHIVERNQTKFDTIEAYESIL
TGKSKQRSQDFIDYITDLREYDVPYHVRYAIDNDVRCGQWYDVSVSSSGVMLEKRTDLLQ
RAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMVDGQGYLIINRECVAEDIEDIEYTPK
PEYEGHFKVTNVKNEEGLLRHWFAHMQVVKPGIYVTYNGDFFDWPFLETRATHYGLSMKD
ELGFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDM
VRFAMEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEML
LMVQAYKANVICPNKHQSDPEKFYGSQLLESETYIGGHVECLESGVFRSDLPTSFKLDPS
AYELLINNLDRDLQYAIVVEGKMDLESVINYDEVKNSIMEKLMRLRDNPLTEECPLIYHL
DVAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGETYMAKRSDYYH
IKRQLESELVEVGDGQRSKSFLDLPKADQQAKLKDRLKKYCQKAYKRVLEKPVTELREAG
ICMRENPFYVDTVRSFRDRRYEYKGLNKAWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQ
LAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIW
CALPGSFPENYTFKTKDPKKKVTISYPCVMLNVDVARNNTNDQYQTLKDPINKTYTTHSE
CSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQ
AELFDKFLHGSTLEECYSVVASVADRWLDLLDNQGNDIADSELLDYISESSTMSKSLADY
GEQKSCAVTTAKRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAIPVAIFETNADIM
RFYVKKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLH
KKVREKEDRFRQRKLNDIFSSVNRDDAVPSKNSKNQQNIEDLEDFRHSGKSSIYGPRPVV
HRHGVNKEHPVNTSDQVDNQQQSGHASSLCKMLPSQEIAAVEDIDRNVDYHGWLQQKKRK
WKEIREERKRRRLDTSRTVNHVNGSTELSHHMVNHKHQGRTGVNSYFERHELALTRSHWQ
IVQLEPTSQHGQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRH
SYNLIEVIIDEDQFKSESKKLAAHLADPEVEGIYETKVPLEFSAILQTGCVCKVDKAAKK
RNPQDGWSLSELHMKTTTECPYLDQSITFFYLYHSLSDGRAIYVGYFPSSKMIHVVVVNP
FQNKELSPHILERHYYEACQTLSGQPITQKEGISFKVDYVRHIKEAERSLQRIINEHRHH
GPAVAMIECLNAHSLKSGIRALDDFPCISIPCNARDSQYQALGWQNVAAKIGMQRCVTSS
QWLNERITLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNGIPDLGGVNDE
ASSFMDEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGTLFGLDQDLNST
TNFTNDNYCFDATTSCAPAFRVLKQLIQRCLTDAVTSGNIFADAMLQHLYRWLCSPRSRL
HDPALHSMLHKVMQKMFALLVAELRKLGAAIVFASFSKIIIDTGKSDVSAAKAYCDSVIK
TVQNRELFEWIELEPLQFWHSLLFMDQYNYGGIQARLSDGPLEVNSEPGEESVCGESQVD
IVSSWNIAENLPKATQDHFILIVSEFMFIPWKFAQEQATHRASSSIGDLCTPSITAALAE
TFDLQMAEDLKKKIRTYFTDKLLKIVCDPNLQMKAMTNSQKTQETSDANSQSYTHVQKGD
PALEFIKHVCAVLALDQNVQHEVLIMRRNLLKLVRVREFAPEAEFHGLSVSYTLPNVICS
YCNDCRDLDLCRDRALISQEWCCAVPQCGQPYDREAMENALIQIVRQRERLYHLQDLVCL
KCHQIKAAHLADHCTCAGSFSCKEGVSEFCNKIQVFFNIAVNQKFQLLQECTSWILEAR
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgaacggcggtggagataaccggcgccaggactggcgagacaccacgaggatttcaaag
aagcagaaactcatccttaactccgaagaacaactcgaatccaagctcggattcgatgtt
ttcaccgaaggagataaacgactcggctggcttctcactctggcctcttcgtcgtgggag
gatcaggagactcgcaaagtgtacagttgcgtcgatctttatttcgtttgtcaggatggt
tcaacattcaaagcgaagtataaattcaggccatacttttacgtggcaacaaaggataaa
atggaaatggatgtcgaggcatatttgagaaggcgatatgaatctcaaattgcagacatt
gaaattttagagaaagaggatcttgatcttaaaaaccatctatctggcctacacagatcg
tatttaaaaatatcatttgatactgtccaacagttgatgcacgtgaagagggatctaaca
catattgttgagagaaaccaaacgaagtttgataccatagaagcatatgaatctatactg
acaggaaaaagcaagcagcgaagtcaagattttatagattatatcactgatctacgtgaa
tatgatgtcccgtaccatgttcgctatgctattgacaatgatgttagatgtggccagtgg
tacgatgttagtgtatctagttctggggttatgttagagaagaggacggatctcttgcag
cgagctgaagttcatgtctgtgcctttgatattgaaacaacgaagcttcctcttaagttt
cctgatgccgaatatgattccgtaatgatgatctcatacatggttgatggccaaggctat
ctcattattaacagagagtgtgttgcggaagatatagaggatatagagtataccccaaaa
ccagagtatgaagggcactttaaagtaacaaatgtgaaaaatgaggaagggctccttaga
cactggtttgcacatatgcaagtggtgaaacccggcatctatgtaacatataatggtgac
ttctttgattggccatttttggagacaagagcaactcattatggcttgagtatgaaggat
gagcttggattttcttgtgacaagaatcaaggggaatgccgtgctaaatttgcttgccat
ctggattgttttgcttgggtcaaacgtgatagttatcttcctcaaggaagtcagggtctg
aaggctgttacgaaggccaagttgggttacgatcctctagaagttaatcctgaggatatg
gttcgctttgcaatggaaaaaccgcagatgatggcttcatattctgtttcagatgctgtt
tcaacttactacttgtatatgacttatgttcatcccttcattttctcccttgcaaccata
atacctatgccgccagatgaagtcttacgcaaaggaagtgggactttgtgtgaaatgctt
cttatggtccaggcttataaggcaaatgttatctgtccaaacaagcaccagtctgatcca
gagaagttttatggtagtcaactccttgagagtgagacttatattggtggtcatgtggaa
tgcctagaaagtggtgtattcagatctgaccttccaactagttttaagctcgacccgtct
gcctatgagctattgatcaacaaccttgatagagatctgcagtatgccattgtagttgag
gggaagatggatttggaatctgtcataaattatgatgaagtgaagaattccatcatggaa
aagttaatgagattgcgagataatcctttaacggaagaatgtcccctcatatatcatctt
gatgtcgctgcaatgtatccaaacatcatattgacaaataggcttcagccaccatcaata
gtttcagatgagatatgcactgcatgcgactttaatcgtcctggcaaaaagtgtctccgg
aagcttgaatgggtttggcgtggtgaaacgtacatggcaaagagaagtgattattaccac
ataaagaggcagctcgagtctgaacttgtcgaagtaggagatggtcaacgatcaaagtct
tttcttgatttgcctaaagcagatcaacaagcaaagctgaaggaccgcttaaagaaatac
tgtcaaaaggcatataaaagagtcctggaaaagccggtcacagaacttcgagaagcaggg
atctgcatgcgagaaaatcctttctatgttgacaccgtacggagtttccgagataggcga
tatgaatacaaagggcttaataaagcttggaagggtaagctgtctgaagcaaaggctagt
ggaaattccataaaaattcaagaagcacaggacatggtagttctatacgattcattgcag
ctggctcataaatgcattttgaattccttttatggttatgtcatgcgaaagggtgcaagg
tggtactcaatggagatggctggagttgttacatatacgggcgcaaaaatcattcagaat
gctcggttattggttgaaaaaattggaaaacccctcgaattagacacagatggtatctgg
tgtgcattaccaggctcttttcctgagaattatacattcaagacaaaagatcccaaaaag
aaggtgacgatctcctatccttgtgttatgctgaatgttgatgtggcaagaaacaacacc
aatgatcagtaccagactctgaaggaccccatcaataagacgtatacaacacacagtgaa
tgctcaattgagtttgaagtcgatggaccatataaggcaatgattcttcctgcttccaag
gaagaaggtattctgattaagaagcgctatgcagttttcaacgatgatggtacacttgct
gagcttaaaggttttgagattaaacgtagaggtgagctaaagctcatcaaagttttccag
gctgagctttttgataagttccttcatggatcaaccttagaggaatgctattcagtagtt
gcttcagttgcggatcggtggcttgacctgcttgataatcaaggcaatgatattgcggac
agtgagttgcttgattatatatctgaatcaagcacaatgagcaagtctctagccgattat
ggtgagcaaaagtcatgtgcagtaaccacagcaaaaaggcttgctgattttctgggggat
gcaatggtcaaagataaagggttgcgttgtcagtatattgttgcatgtgagccaaaggga
accccagtaagtgaacgtgctattcctgttgcaatatttgaaactaatgctgatatcatg
aggttctatgtcaaaaagtggtgcaaaatatcatcagaagttggaatacgttccattatt
gattggtcttattacaagcaacggcttagttcagcaatccagaagattatcacaattcct
gctgcaatgcagaaggtttcaaaccctgtgccaagggtggttcatcctgattggctgcat
aagaaggttcgtgaaaaagaagacagatttcgccaacgaaaattaaatgatatcttcagc
tcagtgaacagagatgatgcagtgcccagtaaaaattctaaaaatcagcaaaatattgaa
gacctggaagactttagacacagtggtaaatcgtctatatatggtccgaggcctgttgta
catcgtcatggagtcaacaaagaacatccggtaaacactagtgatcaagtggacaatcaa
caacaaagtggtcatgctagcagtctatgcaagatgttaccttcacaagaaattgctgct
gtggaagatattgacaggaatgtagattatcatggatggctacagcaaaaaaagagaaaa
tggaaagagattcgtgaggagaggaaacgccgaaggttggatacctcaaggacagtaaac
catgttaatggcagtactgaattgtctcatcacatggtaaaccacaaacaccagggtaga
actggggttaattcctactttgagcgacatgaattagctctcacacgaagtcactggcag
atagttcagcttgagcctacttcacagcatggacaattttttgcatgggtagttgtggaa
ggagtcatgcacaaaatttcagtaactatcccccgagtgttttacctcaactccaaagct
cctataacagaggaatttcctggaagacgtgtcaacaagattcttcctcatggacgccat
agctacaatttaattgaggttattattgatgaggatcaattcaagtcggagagcaaaaag
ctagcagctcaccttgctgatccagaagtggagggaatatatgaaacaaaggttccattg
gagttcagtgctattctccagacgggttgtgtttgtaaagttgataaagcagctaaaaaa
aggaatccacaagatggttggagtttgagtgagctgcatatgaagacaaccactgagtgc
ccgtatttggaccagtcaataactttcttctacttatatcacagcttgtccgatggacga
gccatttatgtgggatattttccttcgtccaagatgatacatgtcgtggttgttaatcca
tttcaaaacaaggaattatcaccacacattcttgaaagacattattatgaagcttgccaa
acattgtctggtcagcctatcacacaaaaggaaggtattagttttaaggtggattatgtc
aggcacatcaaggaagcggagaggagtctacagagaataataaatgagcataggcatcat
gggcctgcagttgccatgattgagtgcctgaatgcccattcgctgaagtctggtatacga
gctttggatgattttccttgcatcagtatcccttgtaatgctcgggatagccaatatcag
gcactaggctggcaaaatgttgcagcaaagattggaatgcagcgatgtgttacatcctcc
cagtggttaaatgaaaggatcactctctcaagatatgcccatgttcccatagggaatttt
gatgttgattggctcatgcatacagcggatatcttcttttctagagcactgcgtgatcag
caacaggtcttgtggatatctgataatggcatccctgacttgggaggcgtaaatgatgaa
gcatcgtcttttatggatgaggtcaatcaaccggttcttacttacccgggtgcatataga
aaagttactgttgagctgaagattcatcatctggccgttgatgctcttctgaaaagcaac
caagtaaacgaaatggaaggaggcactttgtttggattggaccaggacttgaactctacc
acgaattttactaatgataattactgctttgacgcaacgacctcctgtgcacctgcattt
cgtgtactcaaacagttgatccagaggtgccttacggatgcagtaacatcaggaaacata
tttgctgatgcaatgctgcaacatttgtatcgatggctctgcagcccccggtctagacta
catgacccagctctccacagtatgcttcacaaggttatgcaaaagatgtttgcattgctt
gtggctgaactccgaaaattgggtgctgctattgtgtttgccagcttctcaaaaattata
attgacactggaaagtcagatgtatctgcagccaaagcctactgtgatagtgttattaaa
acagtacaaaatagagaattgtttgagtggattgaacttgagcccttgcagttttggcac
tcattgcttttcatggatcagtacaattatgggggaatacaagctagacttagtgatggg
cctttagaagttaactcagaaccaggtgaagaaagcgtgtgtggtgaatcacaagtcgac
attgtgtcaagctggaacattgcagaaaatttaccgaaggcaactcaggatcacttcatt
ttgattgtttcggaatttatgtttattccatggaaattcgcacaagaacaagctacacat
cgagcatctagtagcattggtgatttatgtacaccatcaatcactgctgcacttgctgaa
acatttgatttgcaaatggcggaagatctaaagaagaagatccgaacttacttcactgac
aaacttctgaaaattgtttgtgaccctaatcttcaaatgaaagcgatgaccaactcccag
aagactcaggagacatcagatgcaaactcacaatcttatacccatgtccagaagggggat
ccagctttagagttcattaagcatgtctgtgcagttttggcccttgaccagaatgtgcag
catgaagttctgatcatgaggagaaatctattaaaacttgttcgtgtgagggaattcgct
ccagaagcagaatttcatggtctctctgtgtcgtatacccttccaaatgtcatttgcagt
tactgcaacgactgcagagaccttgacctgtgtcgagacagagctttgatttctcaggag
tggtgttgtgctgtgccccaatgtgggcaaccttatgatcgtgaagcaatggaaaatgct
cttattcaaattgtgcgacagagagagaggctataccatcttcaagatctggtatgccta
aaatgccaccagattaaagctgcacatttagcagaccactgtacttgtgccggatcattt
agctgcaaggaaggtgtctcagagttctgcaataaaatacaagtcttcttcaacatagct
gtaaatcaaaagtttcaattactccaagagtgcacttcttggattttggaagccagataa

DBGET integrated database retrieval system