Nicotiana tomentosiformis: 104119903
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Entry
104119903 CDS
T05025
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104119903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104119903
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104119903
Membrane trafficking [BR:
nto04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
104119903
Exosome [BR:
nto04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104119903
Exosomal proteins of colorectal cancer cells
104119903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF4512
MKT1_C
CCSMST1
HTH_10
Motif
Other DBs
NCBI-GeneID:
104119903
NCBI-ProteinID:
XP_009629805
LinkDB
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Position
1:39656391..39660886
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AA seq
433 aa
AA seq
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MAGNWLLPAQLTRSGRPVLEAGEVECSLLSSVDLLSEENPNFPHLKSGLLILTTHRLIWV
QESSTTFPPTAVFIPLSAVTHIFSLKKSIKSMFASPRFRFQASLKGMVVVITLILRGKSD
IDSFLEKFWEAWRRKAWEDRVVKSGSEASGSGHGSGGDVGFAVKMPVVGVAGILRKEQEM
WENTDKSLQDAFQDLNALMGKAKEMVILAERMRTKLLSGSTSQATGTNDEEIGTKEEMQE
LLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERSGGMINLIDIYCLFNRARGTEL
ISPDDLLRACSLWEKFDVPVMLRKFDSDVMVIQSKSHSDDEVFTRIRSLVTTPDTLRAGI
TASDAAMTLGIAPAMAKEHLLAAEAKGLLCRDVSPDGFRFFVNLLQEVDADDIFLVKDYG
IYHTWVKAISAAR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaattggctactcccggcacagttgacccggagtgggaggccggtgcttgaa
gcaggtgaagtagagtgcagccttctctcctccgtagacctcctttctgaagaaaaccca
aacttccctcaccttaaatcgggcctcctcattctcacaactcaccgtcttatttgggtc
caagaatcatccaccaccttccctcctactgctgtattcatccctctttcagctgtcact
cacatcttctccctcaaaaaatccatcaagtcaatgtttgcaagccctagattccgattt
caggcctcacttaaagggatggtggtggtgattactttgattcttaggggcaaatcggac
attgactcgtttttagagaagttttgggaagcatggagaaggaaagcttgggaagatcgg
gtagtaaaatctgggtcggaggcttcgggttcgggtcatgggtcgggtggtgatgtagga
tttgcagtgaagatgccggttgttggtgtagctgggatattgaggaaagagcaggagatg
tgggagaatactgataagagcttgcaggatgcttttcaggatttgaatgctctcatgggt
aaggctaaagaaatggtgatcctagctgagagaatgagaacaaagcttctctctggctca
actagtcaggccactggcacaaatgatgaggaaattggcaccaaagaagagatgcaagaa
ttactattaagtgttggtattgtgtctccagttactaaagaatctgctggtgctttgtat
catcaacaattatctcggcagttggcagattttgtcaaaattccactggagagatctgga
ggaatgattaatctcattgacatctattgccttttcaatcgggctcgcggaacagaattg
atctcgcccgatgatttgctgcgtgcttgttctctctgggagaagtttgacgtaccagtt
atgcttcggaagtttgatagtgatgtcatggtcatccagagcaaaagccacagtgatgat
gaggtatttactagaataagatctttggttactacaccggacactttacgagcagggatc
actgctagtgatgctgcaatgactctgggaattgctccagctatggccaaagagcacctt
cttgcagccgaggccaaaggacttctgtgtagagatgttagtccagatggattccgcttt
ttcgtcaatttgttgcaagaagttgatgctgatgatatattcttagtgaaagattatgga
atctaccatacatgggtcaaagctatctctgctgccaggtga
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