KEGG   Nicotiana tomentosiformis: 104119984
Entry
104119984         CDS       T05025                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like isoform X1
  KO
K14791  periodic tryptophan protein 1
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nto03009]
    104119984
Ribosome biogenesis [BR:nto03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    104119984
  Pre-60S particles
   Other pre-60S particles
    104119984
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_RFWD3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 WD_LRWD1 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 104119984
NCBI-ProteinID: XP_009629922
LinkDB
Position
9:7819984..7826863
AA seq 493 aa
MIAAISWVPKGIAKAVPAAAEPPSKEEIEELLKSGLLDKSEDSDNEEAEEDMNVDEFKEN
EDDEVAVALAAANALGKATKDVSLGTDDIANGLKELNMEKYDDEEDDIELFGSGLKDLYY
PSNDMDPYLKDKDNDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGTVNMYV
HHEIIIPAFPLCTAWLDCPIKSGEGKGNFIAVGSMELAIEIWDLDVLDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLGLAWNKEYRNMLASASADQSVKVWDVNTSSCTVTMND
HTDKVQAVAWNPFASQILLSGSFDHTVCLKDVRYPSHGGYKFPVSADVESLAWDPHSEHS
FVVSLENGTVTSFDIRLASSDPTSATKPCFTIHAHDKAVSSMSFNPLVPNLLATGSTDKM
VKLWDLSNNQPSCIATRNTKAGAVFSVSFSDDCPFFLAIGGSKGKLQLWDISSEDAVLNK
YGKYAAQKRPPKS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgatagcagctatttcgtgggttcccaaagggattgcaaaggcagttccagctgcggct
gagcccccttctaaagaagaaattgaggagcttttgaagagtggtctccttgataaaagt
gaagatagtgataatgaggaagctgaagaagatatgaatgttgatgaattcaaggaaaat
gaggatgatgaagttgctgttgcattagcagctgctaatgcacttggaaaagctacaaaa
gatgtctctctaggaaccgatgacatagcaaatggtttaaaggaattgaacatggaaaag
tacgatgacgaggaggatgacattgagcttttcggttcgggactcaaagacttgtactac
ccaagtaatgacatggacccgtatctcaaggataaggataatgactctgaggaggatgag
gacatgacaataaaacctgacgattctattatagtttgtgcaagcaatgatgatgatgtc
agtcatctcgagatttggattttggaagttttatcagatggtactgtaaacatgtatgtt
catcatgagattattattcctgcgtttcctctctgcacagcatggctcgattgccctatt
aaaagtggcgaggggaaagggaacttcatagctgtgggctcaatggaactagcaattgaa
atttgggacctagacgtattggatgaggtgcaaccagctgctgtattaggtggaatcgct
gacataaagaaaaaggggaagaagaaaaccatcaaatacaaaaaggatagccactccgat
tcagtacttggtctcgcttggaacaaggagtataggaatatgcttgccagtgctagtgct
gatcaatcagtcaaggtttgggatgtgaataccagcagctgtactgtcactatgaacgac
catactgacaaggttcaagcagttgcatggaatccatttgcatcacagattcttctgagc
gggtcattcgatcatacagtttgcttgaaggatgtgaggtatccatctcacggtggatat
aaatttccagtatccgctgatgttgaaagcttggcttgggatccacattctgagcattca
tttgtggtcagcttggagaacggtacagttactagttttgatatccgtcttgctagttct
gatccgacttccgcgacgaagccatgtttcactatccatgctcatgataaggcagtgtca
tcgatgtcttttaatcctctagtcccaaatcttcttgcaactggttccacggacaagatg
gttaaactatgggatttgagcaacaaccaaccttcttgtattgcaacaaggaatacaaaa
gctggagctgtcttctctgtttctttctcagatgattgccccttttttcttgctattggt
ggttctaaagggaagttgcagctatgggatatttcttcagaagatgcggtgttgaataaa
tacgggaaatatgccgcgcaaaaaaggccgcccaaatcgtaa

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